Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 AC007342.7-201ENST00000624610 2337 ntBASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM49D1C9J1S8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49D1C9J1S8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49D1C9J1S8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49D1C9J1S8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 ARL2BPP3-201ENST00000421226 480 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AC007563.3-201ENST00000433233 371 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 BMS1P19-201ENST00000433925 393 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 MTND2P6-201ENST00000455337 1030 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 RPS7P7-201ENST00000463499 571 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AC068587.1-201ENST00000483613 781 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 ARL2BPP6-201ENST00000512757 439 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 HAUS1P3-201ENST00000523909 662 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 OR4R2P-201ENST00000530815 597 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 NPM1P35-201ENST00000533043 868 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 MIMT1-201ENST00000597105 1050 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AC007423.1-201ENST00000605009 627 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 RMST_8.1-201ENST00000610287 165 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49D1C9J1S8 AL512283.1-201ENST00000606756 1384 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC106871.1-201ENST00000568324 3102 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 MTND4P24-201ENST00000424002 397 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC092017.2-201ENST00000427600 362 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 MTND2P21-201ENST00000436242 1042 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 VN1R48P-201ENST00000448149 1036 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 RAB28P3-201ENST00000448325 597 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AL162151.2-201ENST00000448875 158 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 NUTF2P7-201ENST00000453086 375 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 RN7SL323P-201ENST00000494712 295 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 HAUS1P1-201ENST00000505275 832 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 IGHV3-32-201ENST00000519182 355 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 OR4V1P-201ENST00000525394 1140 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC091515.1-201ENST00000548110 679 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC068714.1-201ENST00000559623 800 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 LINC00557-201ENST00000563184 1279 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC009101.1-201ENST00000568135 242 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 MIR4644-201ENST00000579929 84 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AL365503.1-201ENST00000605247 905 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC012557.1-201ENST00000607115 611 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC025016.1-201ENST00000616746 682 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 AC024560.2-201ENST00000507981 1497 ntBASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49D1C9J1S8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms