Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MIR4436B1-201ENST00000583272 91 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC040904.1-201ENST00000590850 223 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC123786.2-201ENST00000603459 275 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC131235.4-201ENST00000609288 620 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL138721.1-201ENST00000616756 179 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC007546.2-201ENST00000623996 360 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC004943.3-201ENST00000624116 600 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC055839.1-201ENST00000634467 498 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC116618.1-201ENST00000634617 774 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MKKS-204ENST00000639674 192 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AP000526.1-201ENST00000603308 1388 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC093849.1-201ENST00000563631 2209 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL513185.3-201ENST00000433335 1300 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC105074.1-201ENST00000623380 3095 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL391994.1-201ENST00000254724 282 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 SNORA71.2-201ENST00000364941 134 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 Y_RNA.311-201ENST00000365068 96 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL645733.1-201ENST00000402250 217 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL049697.2-201ENST00000403708 294 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL133264.1-201ENST00000407157 562 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 SETP15-201ENST00000412724 337 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC234781.2-201ENST00000426370 994 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL049745.1-201ENST00000433953 286 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 NPM1P33-201ENST00000438918 872 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 UBE2V1P3-201ENST00000439651 417 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 CCDC75P1-201ENST00000469247 791 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AP001922.4-201ENST00000526967 290 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AP000676.2-201ENST00000529711 301 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 BRD9P1-201ENST00000529855 560 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 UBE2NP1-201ENST00000545592 458 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 ISCA1P3-201ENST00000577104 373 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC090616.2-202ENST00000584248 222 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC015726.1-201ENST00000602353 681 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC100847.1-201ENST00000611316 481 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC005332.6-201ENST00000613178 446 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 AC243756.2-201ENST00000618406 463 ntBASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.53□□□□□ -1.68
TCRBV7S3A2A0A539 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TCRBV7S3A2A0A539 MTND4P34-201ENST00000572715 1371 ntBASIC4.53□□□□□ -1.69
TCRBV7S3A2A0A539 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC131971.1-201ENST00000332881 1482 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RNU1-94P-201ENST00000362627 173 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RNU5D-1-201ENST00000363299 116 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 BMS1P3-201ENST00000372011 932 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL590084.2-201ENST00000401481 382 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 MIR1302-8-201ENST00000408342 128 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 SNORA74C-2-201ENST00000411179 201 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RPL6P29-201ENST00000414863 865 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL139095.3-201ENST00000419672 1203 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL590762.4-201ENST00000425885 253 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 MTND4P32-201ENST00000437189 1237 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RSL24D1P3-201ENST00000449255 495 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RNU7-125P-201ENST00000458760 62 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms