Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC013468.1-201ENST00000608680 598 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC123768.4-201ENST00000616244 701 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL121895.2-201ENST00000619558 447 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL445363.3-201ENST00000623080 671 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 MIR3653-201ENST00000625572 110 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 Z73965.1-201ENST00000623412 2297 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC074029.4-201ENST00000624796 1859 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 METTL21EP-201ENST00000298105 713 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 SNORA70.2-201ENST00000364506 135 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP22-201ENST00000365393 109 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RNU6-185P-201ENST00000384421 107 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 HMGB3P18-201ENST00000406327 590 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RPL23AP48-201ENST00000406913 488 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP36-201ENST00000410197 133 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC013404.1-201ENST00000413068 249 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 CEACAMP8-201ENST00000413902 580 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 MTND4P3-201ENST00000417829 541 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 EIF1P3-201ENST00000423841 334 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC091390.1-201ENST00000433904 331 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC069285.2-201ENST00000440210 275 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC009963.2-201ENST00000453431 138 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC244505.3-201ENST00000454598 187 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RN7SL817P-201ENST00000480777 288 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RN7SL691P-201ENST00000494487 301 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC108475.1-201ENST00000507880 950 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC008958.1-201ENST00000511047 682 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP49-201ENST00000516450 115 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP519-201ENST00000516480 119 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 IGKV2D-10-201ENST00000520194 281 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC090819.1-201ENST00000523800 1111 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC104417.1-201ENST00000523974 751 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 CYCSP29-201ENST00000533731 318 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 PARP1P2-201ENST00000556806 195 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 TVP23BP1-201ENST00000557500 617 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AL035411.2-201ENST00000604022 421 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC097065.2-201ENST00000608159 533 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AL138478.1-201ENST00000612252 832 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 MIR6716-201ENST00000613413 80 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AL445567.2-201ENST00000618935 498 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC007342.8-201ENST00000623278 678 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC099786.3-201ENST00000565735 1410 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 AC017104.4-201ENST00000636283 1592 ntBASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX9Q9Y5X1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 MIR383-201ENST00000362257 73 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RNU1-14P-201ENST00000362759 152 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RNU6-452P-201ENST00000384406 107 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 TAS2R15P-201ENST00000390674 928 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 MTCO1P56-201ENST00000401674 224 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RPL31P52-201ENST00000407532 367 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RN7SKP235-201ENST00000410662 305 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 MTCYBP31-201ENST00000438855 1122 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 HMGB3P21-201ENST00000452483 547 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 PTGES3P5-201ENST00000455109 434 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC010683.1-201ENST00000473673 378 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms