Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPL7P22-201ENST00000466005 733 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 BZW1P2-201ENST00000473537 826 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC093767.1-201ENST00000504523 156 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 RNU6-232P-201ENST00000517144 64 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC008033.2-201ENST00000542626 177 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 CYCSP2-201ENST00000558168 301 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC090888.1-201ENST00000561335 1141 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC109446.2-201ENST00000567872 497 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AL109653.1-201ENST00000603091 248 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC083899.3-201ENST00000603413 594 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC080013.4-201ENST00000607624 649 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC087385.3-201ENST00000620477 187 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AP000676.3-201ENST00000623299 569 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 ZNF734P-201ENST00000419494 1534 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 MIR153-1-201ENST00000384914 90 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC016769.3-201ENST00000396562 315 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC136624.1-201ENST00000400791 413 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 HMGB1P17-201ENST00000403495 628 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 P2RY10P2-201ENST00000416730 913 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC013429.2-201ENST00000418798 781 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL31P45-201ENST00000419532 356 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC104837.2-201ENST00000427236 424 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL35AP21-201ENST00000437667 333 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AL772161.1-201ENST00000439130 476 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AL450023.3-201ENST00000440592 271 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 HMGB3P9-201ENST00000441799 583 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AL137845.2-201ENST00000444292 988 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 TCEA1P1-201ENST00000449716 880 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 RNU7-125P-201ENST00000458760 62 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 BET1P1-201ENST00000482276 359 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC006499.2-201ENST00000513470 337 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC012339.2-201ENST00000523996 453 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 BRD9P1-201ENST00000529855 560 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 PCNPP1-201ENST00000552501 511 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 LLPHP1-201ENST00000603571 367 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL23AP92-201ENST00000603609 255 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AL596327.1-201ENST00000603629 213 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC005084.1-201ENST00000605160 304 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC079228.1-201ENST00000624774 1049 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AC010608.2-201ENST00000624830 470 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01109-201ENST00000603837 3081 ntBASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL4A3BPQ9Y5P4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 IQCB2P-201ENST00000401788 1633 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AC103591.2-201ENST00000265259 766 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 RNVU1-3-201ENST00000364313 161 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 RNU6-356P-201ENST00000384140 107 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 ARF4P3-201ENST00000397387 509 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 COX6B1P1-201ENST00000415962 213 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 TXNL1P1-201ENST00000429528 554 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 SETP8-201ENST00000435341 628 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AL356276.2-201ENST00000435919 558 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 PRPF38AP2-201ENST00000438179 851 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 MRPL48P1-201ENST00000445390 636 ntBASIC5.56□□□□□ -1.52
COL4A3BPQ9Y5P4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms