Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RHEBP2-201ENST00000450289 600 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 DNAJC19P8-201ENST00000452887 259 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 GTF2IP12-201ENST00000456547 356 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 SNORD108-201ENST00000459332 71 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 RN7SL542P-201ENST00000467147 294 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC091959.2-201ENST00000477363 321 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 RPL23AP37-201ENST00000479658 549 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 NAMPTP2-201ENST00000505629 1115 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 SOD1P3-201ENST00000518682 454 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 IGHV3-32-201ENST00000519182 355 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AP003102.1-201ENST00000525638 661 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 TVP23BP1-201ENST00000557500 617 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC087477.6-201ENST00000559595 843 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 FAM27D1-201ENST00000612308 341 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AL669942.2-201ENST00000620352 697 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MTND5P28-201ENST00000438005 1594 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MIR670-201ENST00000390142 98 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 FCF1P5-201ENST00000406490 482 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AC108032.1-201ENST00000416706 207 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 RPS15AP40-201ENST00000419621 391 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 DEFB130D-201ENST00000426866 237 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 UBE2V1P1-201ENST00000430836 445 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AL512326.1-201ENST00000443050 721 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 RPS26P56-201ENST00000444468 240 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MTND1P33-201ENST00000446251 917 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MTND2P39-201ENST00000457230 764 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 RPS27AP17-201ENST00000463344 455 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 SNX5P1-201ENST00000505757 1041 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MTND5P21-201ENST00000531961 522 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AC068339.2-201ENST00000534395 618 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 RN7SL600P-201ENST00000581811 299 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AC053481.4-201ENST00000583164 216 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 BNIP3P4-201ENST00000604946 565 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 RNU4-89P-201ENST00000607443 133 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 MIR6867-201ENST00000610636 67 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 AC068620.4-201ENST00000636730 1182 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 NMD3P1-201ENST00000439704 1488 ntBASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA1Q9Y5H4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 SAGE4P-201ENST00000442271 3381 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 IL6STP1-201ENST00000346911 1020 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RNU6-468P-201ENST00000384003 109 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 PTMAP2-201ENST00000397627 327 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL121834.1-202ENST00000404494 277 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL080315.1-201ENST00000406055 466 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL139095.3-201ENST00000419672 1203 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RPL7P2-201ENST00000427639 268 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms