Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 OR1E3-201ENST00000575608 948 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AC011369.2-201ENST00000624423 1567 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 LINC01613-201ENST00000561476 2780 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC025809.2-201ENST00000625085 1802 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC008171.1-201ENST00000395058 200 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 MIR450B-201ENST00000401182 78 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AL031663.1-201ENST00000437445 219 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 HMGN1P2-201ENST00000445197 310 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 RN7SL568P-201ENST00000493069 298 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC083829.1-201ENST00000503756 657 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC005899.2-201ENST00000584353 90 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 uc_338.29-201ENST00000615099 168 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AL365265.1-201ENST00000621045 234 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AC011455.2-201ENST00000599320 3336 ntBASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM35Q9UPQ4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AL359893.1-201ENST00000447628 1580 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 ZNF285B-201ENST00000561698 1767 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 RNU6-682P-201ENST00000363843 106 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 Y_RNA.314-201ENST00000365114 102 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 OR52E6-202ENST00000379946 954 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 Y_RNA.629-201ENST00000411368 105 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 THEM7P-201ENST00000419556 672 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 USP9YP30-201ENST00000430729 455 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 LAMTOR5P1-201ENST00000444290 270 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AC097359.1-201ENST00000447946 463 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 PSMC1P13-201ENST00000458195 985 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 GM2AP2-201ENST00000491764 562 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AC022206.1-201ENST00000495947 347 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AL035404.1-201ENST00000497982 568 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 TMEM251P1-201ENST00000503717 318 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 MT1CP-201ENST00000567054 174 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 FAM27E4-201ENST00000605259 342 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AP001282.2-201ENST00000616149 309 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AP003789.1-201ENST00000617737 605 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 TNPO1P2-201ENST00000426249 2665 ntBASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.44□□□□□ -1.06
TRIM35Q9UPQ4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms