Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 RNA5SP97-201ENST00000365006 84 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 RNU6-244P-201ENST00000391028 104 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AL590704.1-201ENST00000402856 794 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AC012497.1-201ENST00000429392 575 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 FTH1P9-201ENST00000513251 355 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AC006133.1-201ENST00000617106 264 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 AL139089.1-201ENST00000620372 975 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 MTCO1P14-201ENST00000441695 1559 ntBASIC4.6□□□□□ -1.67
CLIP2Q9UDT6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 SNORA62.3-201ENST00000365110 153 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 CCNB2P1-201ENST00000399411 1150 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 MIR1183-201ENST00000408856 89 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 RPL7AP73-201ENST00000413490 353 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 CR848007.2-201ENST00000424918 787 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 DDX6P1-205ENST00000441966 1436 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AL500522.2-201ENST00000448562 343 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 MTND2P3-201ENST00000452458 470 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 RPL23AP12-201ENST00000467573 473 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AC093853.1-201ENST00000515689 483 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 NARSP2-201ENST00000518524 679 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AC092851.1-201ENST00000535964 478 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 CYCSP30-201ENST00000546447 172 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AC012467.1-201ENST00000607740 256 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 CR589904.2-201ENST00000612533 440 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AL162233.1-201ENST00000620014 944 ntBASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.59□□□□□ -1.67
CLIP2Q9UDT6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.59□□□□□ -1.68
CLIP2Q9UDT6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CLIP2Q9UDT6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 RNU6-40P-201ENST00000384254 107 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 MIR23B-201ENST00000384832 97 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AL138878.1-201ENST00000405131 347 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 SNORA3.3-201ENST00000408712 125 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 RN7SKP156-201ENST00000410308 342 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 RPL7P53-201ENST00000421245 739 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC093698.1-201ENST00000423843 571 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 MTND4LP14-201ENST00000429447 288 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 RANP8-201ENST00000444720 713 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 MTND5P8-201ENST00000449817 1083 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 RPL21P11-201ENST00000461458 483 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 HMGB1P46-201ENST00000520062 610 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC087369.1-201ENST00000520775 996 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC141257.3-201ENST00000572906 215 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 MIR4429-201ENST00000580105 73 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 VN1R84P-201ENST00000593697 235 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC083899.3-201ENST00000603413 594 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AL392048.1-201ENST00000613946 534 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AL121772.2-201ENST00000614331 297 ntBASIC4.58□□□□□ -1.68
CLIP2Q9UDT6 AC039056.2-201ENST00000622261 511 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms