Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL020997.3-201ENST00000602843 359 ntBASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 AP000238.1-201ENST00000608759 426 ntBASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 AC004808.1-201ENST00000627671 721 ntBASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BLOC1S4Q9NUP1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 HMGB1P5-201ENST00000255320 642 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC126755.2-208ENST00000327792 462 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC138969.1-213ENST00000331436 462 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RNU1-14P-201ENST00000362759 152 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 SSXP10-201ENST00000402595 565 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 MTCO3P31-201ENST00000405526 789 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RNA5SP36-201ENST00000410197 133 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 BTF3P8-201ENST00000414577 526 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 COX6CP15-201ENST00000426313 211 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RPL36P19-201ENST00000430744 301 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RPL23AP81-201ENST00000455252 467 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RPS26P28-201ENST00000470806 348 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 BNIP3P41-201ENST00000503774 571 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 STMN1P2-201ENST00000508435 439 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC093755.1-201ENST00000512950 1023 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RNA5SP519-201ENST00000516480 119 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC023632.1-201ENST00000518463 375 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC118942.1-201ENST00000529674 1035 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC026951.1-201ENST00000559530 2459 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 MIR4277-201ENST00000578298 84 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC083899.3-201ENST00000603413 594 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AL353600.1-201ENST00000608148 251 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AL354760.1-201ENST00000608357 643 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 AC011944.2-201ENST00000624440 683 ntBASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.76□□□□□ -1.65
BLOC1S4Q9NUP1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 MTCO1P24-201ENST00000515438 1558 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 RNU6-115P-201ENST00000364310 107 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 MCTS2P-201ENST00000394552 546 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 VN1R51P-201ENST00000411675 945 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 RPS23P10-201ENST00000416185 486 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 MTND4P3-201ENST00000417829 541 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AL161631.1-201ENST00000417933 486 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 CYCSP10-201ENST00000417973 294 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AC027644.1-201ENST00000419595 298 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 TCEA1P2-201ENST00000420496 906 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 EIF1P3-201ENST00000423841 334 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 HSFY7P-201ENST00000432672 318 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 AL132765.1-201ENST00000434165 553 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 HLA-N-201ENST00000437516 135 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 HSFY8P-201ENST00000437934 318 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 NPM1P33-201ENST00000438918 872 ntBASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.75□□□□□ -1.65
BLOC1S4Q9NUP1 HSFY5P-201ENST00000453726 309 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms