Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RPL23AP57-201ENST00000332361 466 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 SNORA64.1-201ENST00000362600 132 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 RN7SKP115-201ENST00000363177 317 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 RNA5SP500-201ENST00000364486 119 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AL512430.2-201ENST00000406786 339 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 OR8G2P-201ENST00000412796 908 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 RPS27AP7-201ENST00000422792 455 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 MTND1P28-201ENST00000435623 950 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 RPL12P46-201ENST00000436610 195 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 CYCSP12-201ENST00000437729 300 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 CYCSP24-201ENST00000445119 316 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC017015.1-201ENST00000477387 286 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 NDUFB5P1-201ENST00000508134 564 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC104986.1-201ENST00000517978 436 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 HSPA8P13-201ENST00000523715 472 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC124068.1-201ENST00000563131 678 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC004492.1-201ENST00000607036 742 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC080013.4-201ENST00000607624 649 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC087241.4-201ENST00000612441 480 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC099842.1-201ENST00000619919 596 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 ELL2P4-201ENST00000446870 1376 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 CASC19-248ENST00000641674 1356 ntBASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCM2LQ9NUG4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 SNORA75-201ENST00000384158 137 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 Y_RNA.517-201ENST00000384551 106 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 OR6C69P-201ENST00000394268 893 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 MIR1286-201ENST00000408112 78 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 MIR320C1-201ENST00000408566 88 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 BMS1P17-202ENST00000416720 316 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC073136.2-201ENST00000417282 849 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AK4P4-201ENST00000419465 646 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AL590609.2-201ENST00000421430 368 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC104333.2-201ENST00000422630 192 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC127526.2-201ENST00000426436 775 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 PRELID3BP10-201ENST00000431957 584 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC239367.2-201ENST00000447309 705 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 MTCYBP1-201ENST00000454315 1119 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 COPS8P2-201ENST00000473228 627 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 RPL7P16-201ENST00000479738 738 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 RN7SL30P-201ENST00000488416 306 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 NENFP3-201ENST00000503735 313 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC113430.1-201ENST00000506872 718 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 RNU6-405P-201ENST00000516637 110 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 SNORA43.3-201ENST00000517240 103 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC025881.1-201ENST00000518851 512 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 HMGN2P36-201ENST00000529541 409 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AP004247.1-201ENST00000531556 1289 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 CR383656.6-201ENST00000550518 394 ntBASIC5.11□□□□□ -1.59
CCM2LQ9NUG4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms