Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 SNORA62.3-201ENST00000365110 153 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 RNU6-891P-201ENST00000384280 111 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 PTMAP2-201ENST00000397627 327 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AMD1P2-201ENST00000412936 992 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 SAGE2P-201ENST00000420011 2126 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 HMGB3P5-201ENST00000428894 612 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 TRIM60P13-201ENST00000432350 1283 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AL358232.1-201ENST00000448030 501 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AL500527.1-201ENST00000448532 255 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 MTCO3P16-201ENST00000454456 754 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AL049829.1-201ENST00000465411 156 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC084357.1-201ENST00000473404 255 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 RPS3AP50-201ENST00000487064 803 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 RN7SL323P-201ENST00000494712 295 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC068305.1-201ENST00000497406 726 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 RNA5SP309-201ENST00000516670 106 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC023161.2-201ENST00000551218 780 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC006960.3-201ENST00000561845 705 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AGGF1P6-201ENST00000569213 976 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AC087499.8-201ENST00000578406 226 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 KLKP1-201ENST00000595979 403 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AP003400.6-201ENST00000624698 740 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 MIR30B-201ENST00000384850 88 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 Z85994.2-201ENST00000434327 452 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC006480.1-201ENST00000449887 378 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC018635.1-201ENST00000468292 1030 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC087385.1-201ENST00000475062 312 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 OR7E13P-201ENST00000526052 910 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AGGF1P8-201ENST00000562979 1000 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 MIR4644-201ENST00000579929 84 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 MIR3944-201ENST00000581277 108 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC012467.1-201ENST00000607740 256 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 CDRT1-208ENST00000630868 794 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 AC024560.2-201ENST00000507981 1497 ntBASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO3Q9BXY4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.4□□□□□ -1.86
RSPO3Q9BXY4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
RSPO3Q9BXY4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.4□□□□□ -1.86
RSPO3Q9BXY4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 RPL17P50-201ENST00000396131 546 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 Z98941.1-201ENST00000407764 100 ntBASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO3Q9BXY4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms