Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.49□□□□□ -1.37
USB1Q9BQ65 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USB1Q9BQ65 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 SNORD27-201ENST00000363981 72 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 RNU6-338P-201ENST00000383888 105 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 RNU4-64P-201ENST00000410795 131 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC108032.1-201ENST00000416706 207 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 RAC1P4-201ENST00000419413 579 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 RN7SL152P-201ENST00000484176 298 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGLV1-62-201ENST00000518003 441 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV2-29-201ENST00000521304 372 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 CYCSP27-201ENST00000527643 293 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC027667.1-201ENST00000545814 304 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.48□□□□□ -1.37
USB1Q9BQ65 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USB1Q9BQ65 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.48□□□□□ -1.37
USB1Q9BQ65 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 PPIAP22-201ENST00000358455 498 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 RNA5SP218-201ENST00000363188 109 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 SNORA23-201ENST00000365128 182 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 RNU6-886P-201ENST00000384319 105 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 MIR548H3-201ENST00000408771 118 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 RNA5SP231-201ENST00000410496 138 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 RNU2-15P-201ENST00000410692 191 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 RNU2-71P-201ENST00000411395 189 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 CYP4F34P-201ENST00000425951 481 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 PSMA2P3-201ENST00000429685 675 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC092647.2-201ENST00000452998 253 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 Z83838.1-202ENST00000456225 839 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 BX323845.2-201ENST00000458382 234 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 FTH1P2-201ENST00000466086 412 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC015820.1-201ENST00000473882 321 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 TRBVB-201ENST00000477100 408 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms