Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NUP88Q99567 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP88Q99567 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP88Q99567 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP88Q99567 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP88Q99567 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NUP88Q99567 MTCYBP27-201ENST00000555160 670 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 AC018552.3-201ENST00000567416 561 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 MIR4277-201ENST00000578298 84 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP88Q99567 MIR4697-201ENST00000582977 78 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP88Q99567 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP88Q99567 Z99497.2-201ENST00000603634 310 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 AC100847.1-201ENST00000611316 481 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 AL450489.1-201ENST00000612071 468 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 MIR8069-1-201ENST00000616627 86 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 MIR8069-2-201ENST00000621412 86 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 AL359757.1-201ENST00000623176 255 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP88Q99567 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP88Q99567 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.46□□□□□ -1.54
NUP88Q99567 SALL4P2-201ENST00000423288 2910 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP88Q99567 AC107982.1-201ENST00000507171 1300 ntBASIC5.46□□□□□ -1.54
NUP88Q99567 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP88Q99567 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NUP88Q99567 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP88Q99567 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 AC025125.1-201ENST00000624743 1922 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 RNU4-40P-201ENST00000364351 143 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 UBBP2-201ENST00000376781 231 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 MIR659-201ENST00000384963 97 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AL590762.2-201ENST00000395798 571 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 ATP5F1P3-201ENST00000397213 657 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 RPL31P52-201ENST00000407532 367 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 TMBIM7P-201ENST00000418074 855 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AC004690.1-201ENST00000418216 328 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AC233981.1-201ENST00000423224 461 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 MTND4P20-201ENST00000424125 869 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.45□□□□□ -1.54
NUP88Q99567 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 MTND2P28-201ENST00000457540 1044 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP88Q99567 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP88Q99567 RN7SKP46-201ENST00000515942 234 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP88Q99567 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP88Q99567 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 AC068831.4-201ENST00000556118 109 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 AC087477.6-201ENST00000559595 843 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP88Q99567 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP88Q99567 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP88Q99567 AL603755.1-201ENST00000619504 163 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 AC022106.2-201ENST00000620114 757 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 MIR3974-201ENST00000637126 96 ntBASIC5.45□□□□□ -1.54
NUP88Q99567 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NUP88Q99567 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP88Q99567 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP88Q99567 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NUP88Q99567 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP88Q99567 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP88Q99567 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP88Q99567 RNA5SP447-201ENST00000363749 119 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 Y_RNA.311-201ENST00000365068 96 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 SNORA62-201ENST00000365493 153 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP88Q99567 Y_RNA.408-201ENST00000383987 102 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 RNU6-178P-201ENST00000384631 104 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AL590084.2-201ENST00000401481 382 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AL359643.1-201ENST00000404109 423 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP88Q99567 FCF1P2-201ENST00000415284 583 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AC009518.2-201ENST00000418056 731 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 UQCRBP1-201ENST00000421129 336 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP88Q99567 H2AFZP5-201ENST00000446960 382 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 RNU7-125P-201ENST00000458760 62 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP88Q99567 AC104090.1-201ENST00000506341 1171 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AC105313.1-201ENST00000509121 353 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP88Q99567 Y_RNA.688-201ENST00000516565 95 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP88Q99567 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms