Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL137790.1-201ENST00000634283 177 ntBASIC5.64□□□□□ -1.51
IFT140Q96RY7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 RPL35AP12-201ENST00000425362 338 ntBASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
IFT140Q96RY7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
IFT140Q96RY7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
IFT140Q96RY7 SNORA54-201ENST00000384281 123 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.63□□□□□ -1.51
IFT140Q96RY7 ATP5C1P1-201ENST00000441945 895 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 S100A11P1-201ENST00000477525 312 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 VN1R104P-201ENST00000505115 1009 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.63□□□□□ -1.51
IFT140Q96RY7 KCTD9P6-201ENST00000522306 950 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 OR4R3P-201ENST00000525084 838 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.63□□□□□ -1.51
IFT140Q96RY7 AC091905.1-201ENST00000624400 311 ntBASIC5.63□□□□□ -1.51
IFT140Q96RY7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
IFT140Q96RY7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
IFT140Q96RY7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
IFT140Q96RY7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
IFT140Q96RY7 RN7SKP97-201ENST00000410966 333 ntBASIC5.62□□□□□ -1.51
IFT140Q96RY7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 AC008885.1-201ENST00000514930 301 ntBASIC5.62□□□□□ -1.51
IFT140Q96RY7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
IFT140Q96RY7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
IFT140Q96RY7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.62□□□□□ -1.51
IFT140Q96RY7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
IFT140Q96RY7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC093849.1-201ENST00000563631 2209 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
IFT140Q96RY7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 GSTM3P2-201ENST00000412746 530 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC007899.1-201ENST00000412776 775 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AL139281.1-201ENST00000422120 335 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AL139132.1-201ENST00000431587 344 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC093755.1-201ENST00000512950 1023 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 APOOP4-201ENST00000513530 597 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AP000926.4-201ENST00000527351 454 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 OR7A8P-201ENST00000595427 913 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 EIF1P6-201ENST00000600054 334 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.61□□□□□ -1.51
IFT140Q96RY7 AL732372.2-225ENST00000642124 456 ntBASIC5.61□□□□□ -1.51
IFT140Q96RY7 AC007390.2-201ENST00000606229 3803 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT140Q96RY7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 RNA5SP146-201ENST00000410743 123 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 AC010374.2-201ENST00000512933 535 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 COX6B1P6-201ENST00000522347 255 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 AP006245.1-201ENST00000522549 120 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 AP002404.1-201ENST00000532005 451 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 AC006946.3-201ENST00000609791 756 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT140Q96RY7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
IFT140Q96RY7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 OTUD4P1-201ENST00000237841 3067 ntBASIC5.6□□□□□ -1.51
IFT140Q96RY7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.6□□□□□ -1.51
IFT140Q96RY7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT140Q96RY7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
IFT140Q96RY7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT140Q96RY7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
IFT140Q96RY7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 RNA5SP42-201ENST00000364278 115 ntBASIC5.59□□□□□ -1.51
IFT140Q96RY7 NACAP7-201ENST00000407371 609 ntBASIC5.59□□□□□ -1.51
IFT140Q96RY7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT140Q96RY7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.59□□□□□ -1.51
IFT140Q96RY7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
IFT140Q96RY7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms