Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC010285.3-201ENST00000511668 676 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 MIR3160-1-201ENST00000577972 85 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 MIR4286-201ENST00000580651 93 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC005255.1-201ENST00000593748 216 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC067959.1-201ENST00000604334 379 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 Z82195.1-201ENST00000604558 398 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AL096803.3-201ENST00000609032 532 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 LINC00216-201ENST00000623548 1126 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC007529.1-201ENST00000418574 2178 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 RNA5SP97-201ENST00000365006 84 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL21A1Q96P44 HLFP1-201ENST00000402375 499 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 Z97055.1-201ENST00000419730 712 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 MTCO1P52-201ENST00000433928 531 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 SKP1P1-201ENST00000438081 489 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 RPL7P31-201ENST00000450192 724 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AL645939.1-201ENST00000453429 797 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 PPIAP15-201ENST00000479662 484 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC090543.1-201ENST00000492168 485 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 RNU6-889P-201ENST00000517189 103 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC087369.1-201ENST00000520775 996 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC022790.1-201ENST00000522872 204 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 OR4A12P-201ENST00000530847 918 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 YPEL5P3-201ENST00000547227 352 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 MIR548Y-201ENST00000582739 110 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC244505.7-201ENST00000599675 272 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 MIR6875-201ENST00000617506 72 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 ATE1-AS1-202ENST00000636460 506 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.62□□□□□ -1.83
COL21A1Q96P44 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL21A1Q96P44 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL21A1Q96P44 TNPO1P3-201ENST00000436471 2662 ntBASIC3.62□□□□□ -1.83
COL21A1Q96P44 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 RNF6P1-201ENST00000444889 1784 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 RNU1-87P-201ENST00000363727 170 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 AL359837.1-201ENST00000381357 287 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 RANP4-201ENST00000413361 655 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 AL031663.1-201ENST00000437445 219 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 CBX1P4-201ENST00000439415 457 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 MED6P1-201ENST00000439659 713 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 RNU6-775P-201ENST00000459318 96 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC090877.1-201ENST00000561418 344 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms