Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ELOCP8-201ENST00000439309 332 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ELOCP15-201ENST00000442090 332 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ANP32BP2-201ENST00000454525 545 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 FTH1P2-201ENST00000466086 412 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC020898.1-201ENST00000474167 787 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC087385.1-201ENST00000475062 312 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 HMGB1P21-201ENST00000502313 581 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC087369.1-201ENST00000520775 996 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 OR4A12P-201ENST00000530847 918 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AL121594.4-201ENST00000556211 1196 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 MTND4LP24-201ENST00000572277 291 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC141257.3-201ENST00000572906 215 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC128687.2-201ENST00000609657 566 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC090912.3-201ENST00000609775 533 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 C2orf27A-204ENST00000623058 969 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC073530.2-201ENST00000623987 261 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 FAM35DP-201ENST00000323387 2712 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC066616.2-201ENST00000559334 1481 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RPRD1AQ96P16 AC083899.2-201ENST00000423285 1376 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 RNU1-64P-201ENST00000365443 163 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AC114814.2-201ENST00000419195 485 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL159169.1-201ENST00000421119 127 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AC083863.1-201ENST00000438811 231 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 GAPDHP36-201ENST00000480688 918 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 RPL31P61-201ENST00000496160 376 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AC010285.3-201ENST00000511668 676 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 NPM1P41-201ENST00000512920 831 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 MTND4LP31-201ENST00000514859 294 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AC099669.2-201ENST00000616549 437 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 AL354798.1-201ENST00000622505 329 ntBASIC4.03□□□□□ -1.76
RPRD1AQ96P16 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPRD1AQ96P16 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
RPRD1AQ96P16 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC097504.1-201ENST00000515103 2415 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 RN7SL323P-201ENST00000494712 295 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC012170.1-201ENST00000495139 359 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 RPL30P11-201ENST00000495304 339 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 NIPA2P2-201ENST00000496376 1083 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AL139099.1-201ENST00000497398 403 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 CBX3P2-202ENST00000583365 535 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 SUMO2P14-201ENST00000604488 293 ntBASIC4.02□□□□□ -1.77
RPRD1AQ96P16 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RPRD1AQ96P16 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms