Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC005539.1-201ENST00000443768 1479 ntBASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHMP4CQ96CF2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 RNU6-492P-201ENST00000363035 104 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 RPS16P5-201ENST00000406501 404 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 MTND4P22-201ENST00000413116 1169 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 SKP1P3-201ENST00000429280 487 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC005154.2-201ENST00000438110 379 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 RPS5P7-201ENST00000456664 608 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 RPS3AP22-201ENST00000488297 769 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC025164.1-201ENST00000496249 478 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC010486.2-201ENST00000505572 483 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AF186190.1-201ENST00000517470 480 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC007834.2-201ENST00000536310 343 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 MTCYBP27-201ENST00000555160 670 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 DUXAP1-201ENST00000556632 463 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC209154.1-201ENST00000582156 337 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AL031281.1-201ENST00000604049 488 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC131235.4-201ENST00000609288 620 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC243756.2-201ENST00000618406 463 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC025125.1-201ENST00000624743 1922 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 AP000776.1-201ENST00000530032 1663 ntBASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHMP4CQ96CF2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 XPOTP1-201ENST00000443317 2398 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 RNU1-83P-201ENST00000363426 164 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 RNU6-444P-201ENST00000383988 108 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AL356131.1-201ENST00000405826 414 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 BOLA3P4-201ENST00000418151 400 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 NRBF2P3-201ENST00000432731 865 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC010881.1-201ENST00000433830 235 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 HMGB3P9-201ENST00000441799 583 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 MTND1P16-201ENST00000465177 898 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC108751.2-201ENST00000469993 231 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 OR52A4P-201ENST00000472867 958 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 RPL30P11-201ENST00000495304 339 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC025674.1-201ENST00000507074 324 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC079395.1-201ENST00000510981 262 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 VN1R82P-201ENST00000601481 356 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC104785.1-201ENST00000603220 588 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC116618.1-201ENST00000634617 774 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AL136164.3-201ENST00000624429 3978 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 A2MP1-204ENST00000566278 4130 ntBASIC5.62□□□□□ -1.51
CHMP4CQ96CF2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 OR56B2P-201ENST00000317102 954 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 RNU6-146P-201ENST00000384602 108 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 MIR921-201ENST00000401133 56 ntBASIC5.61□□□□□ -1.51
CHMP4CQ96CF2 RAP1BP1-201ENST00000412709 553 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms