Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL390862.1-201ENST00000635467 1469 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 RNU6-251P-201ENST00000363235 104 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HPS3Q969F9 RSU1P3-201ENST00000412878 835 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 COX6B1P1-201ENST00000415962 213 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AC009237.2-201ENST00000421358 284 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AL590762.4-201ENST00000425885 253 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC023347.2-201ENST00000433994 462 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 RPS25P9-201ENST00000435591 252 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 NPM1P33-201ENST00000438918 872 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AL031584.1-201ENST00000447169 754 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 SLC25A18P1-201ENST00000449385 454 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 EIF4A1P11-201ENST00000451239 222 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 RPL35AP28-201ENST00000459730 331 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AC063943.1-201ENST00000465434 453 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 RPL7P16-201ENST00000479738 738 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC147055.4-201ENST00000504399 745 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.28□□□□□ -1.56
HPS3Q969F9 RNU6-678P-201ENST00000516832 109 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AC090819.1-201ENST00000523800 1111 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AP001922.4-201ENST00000526967 290 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AP001880.2-201ENST00000538233 448 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.28□□□□□ -1.56
HPS3Q969F9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.28□□□□□ -1.56
HPS3Q969F9 PCNPP1-201ENST00000552501 511 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.28□□□□□ -1.56
HPS3Q969F9 MIR4436B2-201ENST00000581415 91 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 MIR4436B1-201ENST00000583272 91 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC004223.2-201ENST00000590309 544 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AC112220.3-201ENST00000605502 502 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC124312.4-201ENST00000605533 310 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC245297.2-201ENST00000610119 565 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 AC009090.3-201ENST00000616553 565 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.28□□□□□ -1.56
HPS3Q969F9 AC004943.3-201ENST00000624116 600 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HPS3Q969F9 AL445487.1-201ENST00000415694 1580 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HPS3Q969F9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HPS3Q969F9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AL450326.2-201ENST00000421913 1962 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HPS3Q969F9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HPS3Q969F9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HPS3Q969F9 SNORD116-1-201ENST00000384335 95 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 RNU6-146P-201ENST00000384602 108 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AL359643.1-201ENST00000404109 423 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC062016.2-201ENST00000420950 676 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 ARL4AP3-201ENST00000441452 574 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC073648.4-201ENST00000442655 781 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC013828.1-201ENST00000481845 158 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC093281.2-201ENST00000510153 597 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 OR5BM1P-201ENST00000512021 366 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 HIGD1AP5-201ENST00000529959 259 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HPS3Q969F9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.27□□□□□ -1.57
HPS3Q969F9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.27□□□□□ -1.57
HPS3Q969F9 AC011487.3-201ENST00000593607 453 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC004987.4-201ENST00000603383 338 ntBASIC5.27□□□□□ -1.57
HPS3Q969F9 AC105129.3-201ENST00000605455 485 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms