Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 BTF3P15-201ENST00000455606 336 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RPS27AP17-201ENST00000463344 455 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC068781.1-201ENST00000488231 618 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC105417.1-201ENST00000514691 285 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RNU2-46P-201ENST00000517038 113 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 CDC42P3-201ENST00000518493 633 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 BTF3P12-201ENST00000519620 469 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 GTF2IP8-201ENST00000560687 584 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 MIR3176-201ENST00000582210 90 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL513327.3-201ENST00000602618 469 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL390240.1-201ENST00000612950 384 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC022467.1-201ENST00000614738 749 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL356585.4-201ENST00000623078 1229 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 CASC19-221ENST00000641309 1382 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL022323.4-201ENST00000623980 13120 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 ASNSP1-204ENST00000641977 1664 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 Y_RNA.197-201ENST00000364004 102 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RNU6-282P-201ENST00000365357 103 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 SNORA32.2-201ENST00000384049 122 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RNU6-985P-201ENST00000410182 104 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RNU2-64P-201ENST00000411315 191 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AL133173.1-201ENST00000423458 397 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 NIPA2P1-201ENST00000426223 976 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RPS26P30-201ENST00000443431 335 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RPL32P28-201ENST00000443577 397 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 MEMO1P4-201ENST00000453590 386 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RNU7-152P-201ENST00000458982 64 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC063943.1-201ENST00000465434 453 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC083798.1-201ENST00000472671 131 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RPL7L1P4-201ENST00000513004 707 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 SNRPGP18-201ENST00000553000 214 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AC015922.4-201ENST00000612568 690 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 Z69720.2-201ENST00000624755 279 ntBASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEDD1Q8NHV4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 RNU6-543P-201ENST00000362576 108 ntBASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 U8.14-201ENST00000390843 143 ntBASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 OR3A2-201ENST00000408891 1076 ntBASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 BTF3P9-201ENST00000418784 283 ntBASIC6.65□□□□□ -1.34
NEDD1Q8NHV4 ELOCP4-201ENST00000420090 333 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms