Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL138880.1-201ENST00000405824 642 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 SPTLC1P2-201ENST00000407089 121 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RSU1P3-201ENST00000412878 835 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL591848.1-201ENST00000413092 322 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC007435.1-201ENST00000421086 415 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL139421.1-201ENST00000423010 169 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 Z74021.1-201ENST00000423610 407 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC009961.3-201ENST00000449832 765 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RPL21P134-201ENST00000453468 483 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC090142.1-201ENST00000465776 462 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RPL7P16-201ENST00000479738 738 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC004453.1-201ENST00000487895 408 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC104090.1-201ENST00000506341 1171 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 OR5M14P-201ENST00000506803 618 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RNU6-416P-201ENST00000516265 103 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 snoU109.6-201ENST00000516831 118 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 IGLV3-26-201ENST00000520756 302 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 MIR4666A-201ENST00000580160 79 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 MIR4999-201ENST00000585029 91 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC096553.1-201ENST00000605169 829 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC023813.4-201ENST00000607580 580 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC072039.2-201ENST00000608883 439 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC013562.2-201ENST00000611632 603 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC098679.5-201ENST00000624394 571 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 AC091965.5-201ENST00000624785 342 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 ZFRP1-201ENST00000457579 2970 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 EOGT-210ENST00000615922 1931 ntBASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP4Q8N3C7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 RNU6-553P-201ENST00000364047 96 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 SNORA74A-201ENST00000364089 198 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AL589647.1-201ENST00000402485 466 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 SNORA11C-201ENST00000408532 129 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 RNA5SP39-201ENST00000411245 120 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 COX6B1P1-201ENST00000415962 213 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 GAPDHP49-201ENST00000421421 961 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 NRBF2P3-201ENST00000432731 865 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC098826.1-201ENST00000433943 471 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 KCTD10P1-201ENST00000434203 625 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AL627308.1-201ENST00000435693 821 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 OR1H1P-201ENST00000448731 937 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC108463.1-201ENST00000450258 347 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC097262.1-201ENST00000452559 548 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms