Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 RNU6-628P-201ENST00000410675 107 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AL691447.1-201ENST00000419456 387 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 HMGB3P5-201ENST00000428894 612 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 RPS27AP12-201ENST00000429552 465 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 SCARNA14-201ENST00000516903 136 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AC141257.3-201ENST00000572906 215 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 ZYXP1-201ENST00000617638 118 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 FP236240.3-201ENST00000623061 327 ntBASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDKL3Q8IVW4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 RNA5SP283-201ENST00000365604 119 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 MIR320B1-201ENST00000390209 79 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 PPIAP31-201ENST00000405422 495 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC114814.2-201ENST00000419195 485 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 VN1R48P-201ENST00000448149 1036 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC104629.2-201ENST00000468627 598 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC006511.1-201ENST00000470614 315 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 TMED11P-201ENST00000479478 690 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 OR7E13P-201ENST00000526052 910 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC007687.1-201ENST00000602704 304 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC092653.1-201ENST00000608509 531 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC139769.3-201ENST00000618383 175 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC068831.8-201ENST00000620171 435 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC138649.5-201ENST00000637456 137 ntBASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CDKL3Q8IVW4 AC024560.2-201ENST00000507981 1497 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 RN7SKP227-201ENST00000364445 330 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 SNORA11-201ENST00000408789 128 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AC004975.1-201ENST00000428733 208 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 MTCO1P45-201ENST00000431457 267 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AL138799.3-201ENST00000438968 350 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 ARL5AP3-201ENST00000439327 386 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 HMGB3P30-201ENST00000457863 606 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 RPL5P13-201ENST00000462840 709 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 RPL23AP62-201ENST00000463396 453 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 VN1R105P-201ENST00000486595 910 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AL139099.1-201ENST00000497398 403 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 EIF1AXP2-201ENST00000555940 413 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AL121576.1-201ENST00000556055 276 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.81□□□□□ -1.8
CDKL3Q8IVW4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms