Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.71□□□□□ -1.66
CTR9Q6PD62 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTR9Q6PD62 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTR9Q6PD62 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTR9Q6PD62 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTR9Q6PD62 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 TCEA1P4-201ENST00000415066 844 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 AF228730.2-201ENST00000438784 848 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 OR9M1P-201ENST00000459641 921 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 SNORD116-26-201ENST00000516006 96 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC087369.1-201ENST00000520775 996 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC079148.1-201ENST00000565944 819 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 AL133445.2-201ENST00000611191 527 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AL354798.1-201ENST00000622505 329 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 FP236240.3-201ENST00000623061 327 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC097460.3-201ENST00000623099 442 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AC073530.2-201ENST00000623987 261 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AL773545.4-201ENST00000637262 310 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 AL513478.4-201ENST00000641636 310 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTR9Q6PD62 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTR9Q6PD62 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTR9Q6PD62 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.7□□□□□ -1.66
CTR9Q6PD62 MTCO1P14-201ENST00000441695 1559 ntBASIC4.7□□□□□ -1.66
CTR9Q6PD62 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTR9Q6PD62 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 RNU6-792P-201ENST00000363490 107 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 SNORA3C-201ENST00000408792 125 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 Z97055.1-201ENST00000419730 712 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 HMGB1P5-202ENST00000451497 985 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 GAPDHP36-201ENST00000480688 918 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 RNU6-1308P-201ENST00000516817 103 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC005255.1-201ENST00000593748 216 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC015726.1-201ENST00000602353 681 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC098483.2-201ENST00000603158 454 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC245389.2-201ENST00000616023 576 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC242843.1-201ENST00000618702 573 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AL163051.2-201ENST00000618976 735 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 AC124312.6-202ENST00000623624 418 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTR9Q6PD62 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTR9Q6PD62 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTR9Q6PD62 RPS4XP5-202ENST00000449995 1334 ntBASIC4.69□□□□□ -1.66
CTR9Q6PD62 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CTR9Q6PD62 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 AL121882.1-201ENST00000422893 417 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 HIGD1AP4-201ENST00000430194 280 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 UBE2V1P6-201ENST00000430840 422 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTR9Q6PD62 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 AC083863.1-201ENST00000438811 231 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 RPS3AP6-201ENST00000484430 795 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTR9Q6PD62 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTR9Q6PD62 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTR9Q6PD62 MTND4LP31-201ENST00000514859 294 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 HIGD1AP18-201ENST00000520730 278 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 AC106785.3-201ENST00000564064 847 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 MIR5685-201ENST00000579080 79 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 CBX3P2-202ENST00000583365 535 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.68□□□□□ -1.66
CTR9Q6PD62 AC080188.3-201ENST00000624842 748 ntBASIC4.68□□□□□ -1.66
CTR9Q6PD62 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms