Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 SNORA71.2-201ENST00000364941 134 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 SNORA70F-201ENST00000384142 135 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL034403.1-201ENST00000399414 885 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 MIR298-201ENST00000401212 88 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 HMGB3P18-201ENST00000406327 590 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL049610.1-201ENST00000423374 372 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 C8orf59P1-201ENST00000429930 303 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL359265.2-201ENST00000434367 631 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL772161.1-201ENST00000439130 476 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 HSPE1P22-201ENST00000456856 327 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6-599P-201ENST00000459383 107 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6-1193P-201ENST00000459461 107 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC006967.1-201ENST00000467608 589 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC022795.1-201ENST00000473808 480 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RPL30P6-201ENST00000475925 342 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 HSPE1P23-201ENST00000509838 286 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 IGKV1-32-201ENST00000519290 311 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 NDUFA5P2-201ENST00000519723 344 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC090151.1-201ENST00000520784 730 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC011260.1-201ENST00000578420 472 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 FAM106CP-201ENST00000582212 507 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 MIR4801-201ENST00000582704 82 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC008759.1-201ENST00000589783 983 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 VN1R82P-201ENST00000601481 356 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC004948.1-201ENST00000609858 672 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL355073.2-201ENST00000612106 557 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC005332.10-201ENST00000612725 619 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6-368P-201ENST00000620928 107 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RNU6-538P-201ENST00000622329 107 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 AL359740.1-201ENST00000624340 592 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 MIR4278-201ENST00000636094 69 ntBASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZNF549Q6P9A3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AC021242.1-201ENST00000507315 2035 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 RNU6-543P-201ENST00000362576 108 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 RNA5SP105-201ENST00000391123 113 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 SDHCP2-201ENST00000398565 501 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 MIR937-201ENST00000401271 86 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 Y_RNA.604-201ENST00000410574 102 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 RNA5SP146-201ENST00000410743 123 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 YWHAEP5-201ENST00000431545 765 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AL049745.1-201ENST00000433953 286 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 HMGB3P10-201ENST00000434734 572 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AL354941.1-201ENST00000438600 464 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 HMGB1P48-201ENST00000446155 598 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AP000936.2-201ENST00000447151 681 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 RPS27AP15-201ENST00000447672 466 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 MRPL42P4-201ENST00000453267 443 ntBASIC4.45□□□□□ -1.7
ZNF549Q6P9A3 AL035407.2-201ENST00000454090 378 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms