Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC021755.1-201ENST00000559747 1447 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC073429.2-201ENST00000569694 1444 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 DDX18P3-201ENST00000404856 2007 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL592182.3-201ENST00000642132 3304 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 ZNF33CP-201ENST00000432492 2030 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 TMSB4XP4-201ENST00000323496 618 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC019155.1-201ENST00000382242 574 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 RNA5SP339-201ENST00000390987 122 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AL031985.1-201ENST00000392713 418 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 GLULP6-201ENST00000399502 913 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 U3.32-201ENST00000408116 212 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 RPL7P30-201ENST00000420888 709 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 BX119904.4-201ENST00000424402 301 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 MED14P1-201ENST00000430517 648 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AL161722.2-201ENST00000434731 981 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC129850.1-201ENST00000436203 508 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC012075.1-201ENST00000436549 580 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 MTND1P30-201ENST00000441241 901 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC104634.1-201ENST00000452720 462 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 MEMO1P3-201ENST00000459811 302 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 SETP11-201ENST00000473027 690 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC090453.1-201ENST00000495560 436 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 RN7SL466P-201ENST00000497546 295 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC093767.1-201ENST00000504523 156 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC006427.1-201ENST00000514359 712 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 RN7SKP234-201ENST00000517173 224 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC087276.1-201ENST00000529659 480 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC027544.3-201ENST00000535082 757 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC022404.1-201ENST00000555320 273 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 ACTR3BP3-201ENST00000565577 979 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC008521.2-201ENST00000591021 259 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC008814.1-201ENST00000603797 406 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC011626.1-201ENST00000604710 562 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC018695.5-201ENST00000605872 315 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC245008.1-201ENST00000608123 476 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC106028.5-201ENST00000610332 395 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 MIR7844-201ENST00000616161 122 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC009318.4-201ENST00000620496 486 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 Z69908.1-201ENST00000622603 247 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AC000123.2-201ENST00000623124 461 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AL356596.1-201ENST00000624230 379 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 ZNF833P-201ENST00000424938 1494 ntBASIC4.86□□□□□ -1.63
RNF220Q5VTB9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF220Q5VTB9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 MT-TH-201ENST00000387441 69 ntBASIC4.85□□□□□ -1.63
RNF220Q5VTB9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
RNF220Q5VTB9 VN1R8P-201ENST00000407739 893 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms