Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AC010591.1-201ENST00000603941 649 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AL355365.1-201ENST00000616480 294 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 MIR3651-201ENST00000630427 90 ntBASIC4.29□□□□□ -1.72
RFX7Q2KHR2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFX7Q2KHR2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC005326.1-201ENST00000429197 123 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 FTH1P24-201ENST00000503502 462 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 MIR4738-201ENST00000579134 87 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 ZNF415P1-201ENST00000582279 1166 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AP001002.2-201ENST00000625137 386 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC007656.2-201ENST00000624902 4547 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX7Q2KHR2 AC068647.1-201ENST00000489539 2265 ntBASIC4.28□□□□□ -1.72
RFX7Q2KHR2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
RFX7Q2KHR2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 RNU4-35P-201ENST00000362588 141 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 NDUFB4P4-201ENST00000404822 243 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC005300.1-201ENST00000428401 373 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 RPS15AP29-201ENST00000445539 400 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC239798.3-201ENST00000454459 408 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 CAB39P1-201ENST00000502277 460 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 PCBP2P3-201ENST00000509726 843 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 MIR5195-201ENST00000583555 115 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AL031985.3-201ENST00000565390 2449 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 SNORD17-201ENST00000390930 237 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 MTND6P5-201ENST00000448266 512 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AL133244.1-201ENST00000456007 258 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AP000563.1-201ENST00000490865 758 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 DUXAP6-201ENST00000553858 601 ntBASIC4.27□□□□□ -1.73
RFX7Q2KHR2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX7Q2KHR2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 NMD3P1-201ENST00000439704 1488 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AL133412.1-201ENST00000380194 2992 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC009302.1-201ENST00000417147 390 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms