Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PRELID3BP10-201ENST00000431957 584 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 RPL7P11-201ENST00000437586 658 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC092393.1-201ENST00000439625 742 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 TVP23BP2-201ENST00000455082 615 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RPL6P9-201ENST00000466502 859 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC104982.1-201ENST00000478775 574 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC146944.2-203ENST00000502493 354 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC084024.2-201ENST00000503480 791 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC093752.1-206ENST00000511823 336 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC139495.1-202ENST00000513164 354 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 FTH1P9-201ENST00000513251 355 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 SNORA19.3-201ENST00000516165 130 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC118942.1-201ENST00000529674 1035 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AP001317.1-201ENST00000531194 960 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN1BQ07699 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC010928.3-201ENST00000587712 541 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 BNIP3P27-201ENST00000599991 412 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AL022067.1-201ENST00000602426 454 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AL606834.3-201ENST00000602615 496 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AL049634.3-201ENST00000604968 457 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AP000894.4-201ENST00000610185 483 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 MIR6886-201ENST00000619864 61 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AP003485.1-201ENST00000625093 753 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC099654.8-201ENST00000637757 681 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN1BQ07699 ZNF663P-202ENST00000641770 1131 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCN1BQ07699 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN1BQ07699 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN1BQ07699 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC018555.1-201ENST00000567548 1980 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AC130650.2-201ENST00000618736 2403 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN1BQ07699 RN7SKP95-201ENST00000362860 303 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RNU6-251P-201ENST00000363235 104 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RNA5SP507-201ENST00000363603 121 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RNVU1-3-201ENST00000364313 161 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RN7SKP269-201ENST00000365545 319 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RNU6-339P-201ENST00000384310 107 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AL161909.1-201ENST00000397390 712 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN1BQ07699 RPS23P10-201ENST00000416185 486 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 KRR1P1-201ENST00000419430 803 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC244098.2-201ENST00000422068 99 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AL513174.1-201ENST00000423182 629 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC068287.1-201ENST00000430283 295 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 KCTD10P1-201ENST00000434203 625 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AL138799.3-201ENST00000438968 350 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN1BQ07699 NPM1P49-201ENST00000448027 714 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 TRBV26-201ENST00000456572 344 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 MTCO3P2-201ENST00000457365 171 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AL133477.1-201ENST00000457472 514 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AC004815.1-201ENST00000484185 331 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC025164.1-201ENST00000496249 478 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN1BQ07699 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 RNU6-276P-201ENST00000516114 96 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RNA5SP309-201ENST00000516670 106 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 RN7SKP116-201ENST00000516902 319 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 SNORA48.10-201ENST00000516965 160 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 DEFB130C-202ENST00000530001 230 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 ZNF705CP-201ENST00000530515 889 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AC107016.1-201ENST00000550463 337 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN1BQ07699 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 AC022726.1-201ENST00000587475 207 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AC087763.1-201ENST00000603391 286 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 IGHV3-29-201ENST00000604817 344 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN1BQ07699 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms