Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL16A1Q07092 AC007656.2-201ENST00000624902 4547 ntBASIC4.58□□□□□ -1.68
COL16A1Q07092 AC104446.1-201ENST00000613728 1321 ntBASIC4.58□□□□□ -1.68
COL16A1Q07092 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.58□□□□□ -1.68
COL16A1Q07092 RNA5SP103-201ENST00000459503 118 ntBASIC4.58□□□□□ -1.68
COL16A1Q07092 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.58□□□□□ -1.68
COL16A1Q07092 RNU1-41P-201ENST00000516161 162 ntBASIC4.58□□□□□ -1.68
COL16A1Q07092 RNU1-48P-201ENST00000516400 162 ntBASIC4.58□□□□□ -1.68
COL16A1Q07092 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
COL16A1Q07092 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL16A1Q07092 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL16A1Q07092 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AL139281.1-201ENST00000422120 335 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.57□□□□□ -1.68
COL16A1Q07092 RN7SL594P-201ENST00000470590 287 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AC112198.1-201ENST00000505369 1220 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC103783.1-201ENST00000520506 373 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 MIR4319-201ENST00000577285 85 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AC128687.2-201ENST00000609657 566 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AC091905.1-201ENST00000624400 311 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL16A1Q07092 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL16A1Q07092 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL16A1Q07092 THAP12P8-201ENST00000447914 2115 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL16A1Q07092 Z95331.1-201ENST00000623075 23112 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC138393.1-206ENST00000540997 1886 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 OR5J1P-201ENST00000313544 939 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 HLFP1-201ENST00000402375 499 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL16A1Q07092 REREP1Y-201ENST00000422655 198 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 NUP35P1-201ENST00000422734 947 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AC105272.1-201ENST00000438604 198 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 REREP2Y-201ENST00000439103 200 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.57□□□□□ -1.68
COL16A1Q07092 KCTD9P6-201ENST00000522306 950 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.57□□□□□ -1.68
COL16A1Q07092 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.57□□□□□ -1.68
COL16A1Q07092 MTND6P33-201ENST00000571794 183 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 AC112503.1-201ENST00000608436 391 ntBASIC4.57□□□□□ -1.68
COL16A1Q07092 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.57□□□□□ -1.68
COL16A1Q07092 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL16A1Q07092 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.56□□□□□ -1.68
COL16A1Q07092 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.56□□□□□ -1.68
COL16A1Q07092 AL645568.2-201ENST00000432815 1337 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL16A1Q07092 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
COL16A1Q07092 RNU6-316P-201ENST00000391027 107 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 AC073069.1-201ENST00000428657 441 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL16A1Q07092 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.56□□□□□ -1.68
COL16A1Q07092 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.56□□□□□ -1.68
COL16A1Q07092 SLC31A1P1-201ENST00000451221 567 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.56□□□□□ -1.68
COL16A1Q07092 AP006245.1-201ENST00000522549 120 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.56□□□□□ -1.68
COL16A1Q07092 AC091544.4-201ENST00000555268 342 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.56□□□□□ -1.68
COL16A1Q07092 NRBF2P5-201ENST00000603087 788 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.56□□□□□ -1.68
COL16A1Q07092 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 AC138965.3-201ENST00000623875 498 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.56□□□□□ -1.68
COL16A1Q07092 AC010266.2-201ENST00000564741 3255 ntBASIC4.56□□□□□ -1.68
COL16A1Q07092 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
COL16A1Q07092 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL16A1Q07092 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL16A1Q07092 CEP170P1-201ENST00000502249 4587 ntBASIC4.55□□□□□ -1.68
COL16A1Q07092 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL16A1Q07092 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL16A1Q07092 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL16A1Q07092 XGY1-201ENST00000381172 446 ntBASIC4.55□□□□□ -1.68
COL16A1Q07092 HDGFP1-201ENST00000405943 252 ntBASIC4.55□□□□□ -1.68
COL16A1Q07092 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.55□□□□□ -1.68
COL16A1Q07092 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL16A1Q07092 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.55□□□□□ -1.68
COL16A1Q07092 MORF4L2P1-201ENST00000503761 858 ntBASIC4.55□□□□□ -1.68
COL16A1Q07092 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.55□□□□□ -1.68
COL16A1Q07092 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.55□□□□□ -1.68
COL16A1Q07092 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.55□□□□□ -1.68
COL16A1Q07092 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.55□□□□□ -1.68
COL16A1Q07092 HIGD1AP1-201ENST00000550979 275 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms