Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 FAM27D1-201ENST00000612308 341 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 AC010975.3-201ENST00000618727 978 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 AL023881.1-201ENST00000621088 301 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK3Q00526 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK3Q00526 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.25□□□□□ -1.73
CDK3Q00526 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK3Q00526 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK3Q00526 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CDK3Q00526 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDK3Q00526 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 LARP1BP1-201ENST00000506036 1359 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK3Q00526 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK3Q00526 ASNSP1-201ENST00000518311 1939 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDK3Q00526 AC000367.1-201ENST00000452711 1766 ntBASIC4.25□□□□□ -1.73
CDK3Q00526 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CDK3Q00526 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDK3Q00526 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDK3Q00526 RNU4-44P-201ENST00000363050 141 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 SNORA70C-201ENST00000384538 135 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 MIR195-201ENST00000385194 87 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AL079342.2-201ENST00000403367 482 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK3Q00526 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 AL358176.3-201ENST00000420757 454 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 RAC1P8-201ENST00000427086 527 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AL450263.2-201ENST00000439400 589 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 MTND6P18-201ENST00000439477 513 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 RAB11AP1-201ENST00000442978 646 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 HMGB3P6-201ENST00000444896 598 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.24□□□□□ -1.73
CDK3Q00526 RPL23AP81-201ENST00000455252 467 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 GAPDHP39-201ENST00000481866 979 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC068587.1-201ENST00000483613 781 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 ARL4AP1-201ENST00000503220 705 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK3Q00526 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 TCP11X3P-202ENST00000514289 1254 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 RNA5SP73-201ENST00000516744 108 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK3Q00526 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.24□□□□□ -1.73
CDK3Q00526 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK3Q00526 MIR4666A-201ENST00000580160 79 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 RN7SL176P-201ENST00000580352 264 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK3Q00526 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.24□□□□□ -1.73
CDK3Q00526 AC020910.2-201ENST00000603635 610 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC233280.2-201ENST00000603917 1070 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AL390816.3-201ENST00000604527 1066 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC023043.4-201ENST00000612081 449 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AL592148.2-201ENST00000612210 372 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC087821.2-201ENST00000637086 450 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 AC026951.1-201ENST00000559530 2459 ntBASIC4.24□□□□□ -1.73
CDK3Q00526 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK3Q00526 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDK3Q00526 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CDK3Q00526 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK3Q00526 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK3Q00526 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK3Q00526 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDK3Q00526 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CDK3Q00526 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDK3Q00526 RNU6-619P-201ENST00000365146 108 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 RNA5SP22-201ENST00000365393 109 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CDK3Q00526 Y_RNA.472-201ENST00000384322 102 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 RN7SKP247-201ENST00000411094 308 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK3Q00526 CEACAMP8-201ENST00000413902 580 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK3Q00526 IPMKP1-201ENST00000425988 855 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AC004975.1-201ENST00000428733 208 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK3Q00526 BTF3P10-201ENST00000433415 495 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AC023347.2-201ENST00000433994 462 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 USP9YP24-201ENST00000434374 697 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK3Q00526 AC105402.2-201ENST00000438503 358 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK3Q00526 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK3Q00526 RPL21P133-201ENST00000443666 476 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 USP9YP17-201ENST00000444617 696 ntBASIC4.23□□□□□ -1.73
CDK3Q00526 AC073587.1-201ENST00000447093 876 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms