Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC004024.1-201ENST00000549244 247 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.08□□□□□ -2.08
HSPG2P98160 KLKP1-201ENST00000595979 403 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 RNU1-18P-201ENST00000363062 164 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 BX276092.3-201ENST00000424182 230 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 OR5AW1P-201ENST00000426334 1006 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.08□□□□□ -2.08
HSPG2P98160 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.08□□□□□ -2.08
HSPG2P98160 DDX18P4-201ENST00000511690 1966 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 PSMA2P1-201ENST00000526365 646 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
HSPG2P98160 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.08□□□□□ -2.08
HSPG2P98160 MIR4425-201ENST00000580572 84 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.08□□□□□ -2.08
HSPG2P98160 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 OR5AC4P-202ENST00000642086 985 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.08□□□□□ -2.08
HSPG2P98160 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 AP003122.5-201ENST00000527668 3766 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 OR51C1P-202ENST00000641159 1444 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.08□□□□□ -2.08
HSPG2P98160 SNORA67.4-201ENST00000384688 142 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 RPS24P12-201ENST00000402084 394 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 NPM1P48-201ENST00000436002 853 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 AL603825.1-201ENST00000438481 80 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 SEPT14P1-201ENST00000458703 648 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 RN7SL863P-201ENST00000462370 296 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 TRBV12-2-201ENST00000489763 344 ntBASIC2.08□□□□□ -2.08
HSPG2P98160 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HSPG2P98160 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HSPG2P98160 SNORA18.3-201ENST00000384122 132 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.07□□□□□ -2.08
HSPG2P98160 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.07□□□□□ -2.08
HSPG2P98160 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 AL391417.1-201ENST00000404100 426 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 AC117440.1-201ENST00000474107 571 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.07□□□□□ -2.08
HSPG2P98160 MIR7702-201ENST00000621931 59 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 AL773545.4-201ENST00000637262 310 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 AL513478.4-201ENST00000641636 310 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.07□□□□□ -2.08
HSPG2P98160 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 AC005261.6-201ENST00000623072 1387 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.07□□□□□ -2.08
HSPG2P98160 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 RNA5SP39-201ENST00000411245 120 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 AL513477.1-202ENST00000417061 214 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 NPM1P17-201ENST00000479221 602 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.07□□□□□ -2.08
HSPG2P98160 TRAV15-201ENST00000556680 249 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
HSPG2P98160 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 AC027287.1-201ENST00000553115 1453 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 AL022311.1-201ENST00000623726 19416 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 AC093831.2-201ENST00000624393 3427 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.07□□□□□ -2.08
HSPG2P98160 RSL24D1P1-201ENST00000404972 493 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.07□□□□□ -2.08
HSPG2P98160 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.07□□□□□ -2.08
HSPG2P98160 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.07□□□□□ -2.08
HSPG2P98160 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.07□□□□□ -2.08
HSPG2P98160 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.07□□□□□ -2.08
HSPG2P98160 AC012123.2-201ENST00000485809 248 ntBASIC2.07□□□□□ -2.08
HSPG2P98160 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms