Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPS17P8-201ENST00000434525 335 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 MTND1P16-201ENST00000465177 898 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 RPL7P18-201ENST00000478965 734 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 RN7SL817P-201ENST00000480777 288 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC021146.8-201ENST00000507455 733 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AP000676.2-201ENST00000529711 301 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC021006.3-201ENST00000530771 192 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CL1P78423 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AL161713.1-201ENST00000555538 145 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC145350.1-201ENST00000567426 208 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC107982.3-201ENST00000584957 985 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AC008751.2-201ENST00000597885 980 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AL139344.1-201ENST00000605228 195 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AP001521.1-201ENST00000609150 300 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AL450489.1-201ENST00000612071 468 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC009704.2-201ENST00000618739 483 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AP003485.2-201ENST00000623636 610 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC007490.1-201ENST00000624321 703 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC120349.2-201ENST00000625002 298 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 FAM157B-203ENST00000639350 358 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 ELL2P4-201ENST00000446870 1376 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC104454.1-201ENST00000421341 1401 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC131971.1-201ENST00000332881 1482 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AL049555.1-201ENST00000562834 1933 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
CX3CL1P78423 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 AL592437.2-201ENST00000421655 2434 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CL1P78423 AC011978.2-201ENST00000569835 2054 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CL1P78423 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CL1P78423 FAM3C2-201ENST00000312214 681 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CX3CL1P78423 RNA5SP28-201ENST00000363841 119 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 SNORA74A-201ENST00000364089 198 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 Y_RNA.311-201ENST00000365068 96 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC019155.1-201ENST00000382242 574 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 RNU6-1226P-201ENST00000384317 107 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 SNORD96B-201ENST00000386148 79 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CL1P78423 RNU2-28P-201ENST00000410457 189 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 COX6B1P1-201ENST00000415962 213 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC004690.1-201ENST00000418216 328 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 LINC00993-201ENST00000420453 540 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CL1P78423 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 VDAC1P6-201ENST00000430062 855 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 RPS27P18-201ENST00000431701 247 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 AC004938.1-201ENST00000438468 308 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AL008629.1-201ENST00000438615 184 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CL1P78423 HMGB3P9-201ENST00000441799 583 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 MTCO1P48-201ENST00000448024 1096 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 OR52J1P-201ENST00000450596 932 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 RPL7P16-201ENST00000479738 738 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.82□□□□□ -1.8
CX3CL1P78423 KLRA1P-201ENST00000503499 986 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 NDUFB5P1-201ENST00000508134 564 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms