Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNA5SP189-201ENST00000364920 115 ntBASIC3.33□□□□□ -1.88
LSM6P62312 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.33□□□□□ -1.88
LSM6P62312 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 MTHFD2P2-201ENST00000407725 247 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AC004022.2-201ENST00000413824 193 ntBASIC3.33□□□□□ -1.88
LSM6P62312 MTND4P11-201ENST00000417020 1058 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AC010740.1-201ENST00000417035 684 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AL691447.1-201ENST00000419456 387 ntBASIC3.33□□□□□ -1.88
LSM6P62312 RPL21P109-201ENST00000422213 475 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AL031736.2-201ENST00000426573 787 ntBASIC3.33□□□□□ -1.88
LSM6P62312 RPS24P8-201ENST00000431490 402 ntBASIC3.33□□□□□ -1.88
LSM6P62312 OR4C10P-201ENST00000434991 931 ntBASIC3.33□□□□□ -1.88
LSM6P62312 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM6P62312 SNORA71B-202ENST00000439232 272 ntBASIC3.33□□□□□ -1.88
LSM6P62312 SETD6P1-201ENST00000444575 317 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM6P62312 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 RPL30P11-201ENST00000495304 339 ntBASIC3.33□□□□□ -1.88
LSM6P62312 FTH1P24-201ENST00000503502 462 ntBASIC3.33□□□□□ -1.88
LSM6P62312 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 AC010460.1-201ENST00000507087 466 ntBASIC3.33□□□□□ -1.88
LSM6P62312 MTATP6P22-201ENST00000507369 598 ntBASIC3.33□□□□□ -1.88
LSM6P62312 RAC1P2-201ENST00000511164 579 ntBASIC3.33□□□□□ -1.88
LSM6P62312 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM6P62312 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 MTND5P21-201ENST00000531961 522 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM6P62312 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM6P62312 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM6P62312 SNORA62.6-201ENST00000606322 83 ntBASIC3.33□□□□□ -1.88
LSM6P62312 AC112503.1-201ENST00000608436 391 ntBASIC3.33□□□□□ -1.88
LSM6P62312 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 AC022079.2-201ENST00000619739 566 ntBASIC3.33□□□□□ -1.88
LSM6P62312 RNA5SP196-201ENST00000625967 102 ntBASIC3.33□□□□□ -1.88
LSM6P62312 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM6P62312 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LSM6P62312 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LSM6P62312 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM6P62312 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM6P62312 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LSM6P62312 MIR372-201ENST00000362225 67 ntBASIC3.32□□□□□ -1.88
LSM6P62312 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LSM6P62312 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 RNU6-356P-201ENST00000384140 107 ntBASIC3.32□□□□□ -1.88
LSM6P62312 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
LSM6P62312 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 PPIAP31-201ENST00000405422 495 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AC007390.1-201ENST00000415722 356 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AC127526.1-201ENST00000417526 366 ntBASIC3.32□□□□□ -1.88
LSM6P62312 ARF4P2-201ENST00000430209 526 ntBASIC3.32□□□□□ -1.88
LSM6P62312 USP9YP31-201ENST00000431405 881 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM6P62312 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 AL031663.1-201ENST00000437445 219 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 RPL31P53-201ENST00000457065 348 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM6P62312 RN7SL385P-201ENST00000468873 276 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AP000893.1-201ENST00000474462 794 ntBASIC3.32□□□□□ -1.88
LSM6P62312 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 AC113398.2-201ENST00000507630 558 ntBASIC3.32□□□□□ -1.88
LSM6P62312 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM6P62312 AL163642.2-201ENST00000604722 1019 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AC092653.1-201ENST00000608509 531 ntBASIC3.32□□□□□ -1.88
LSM6P62312 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM6P62312 AC006065.5-201ENST00000623427 349 ntBASIC3.32□□□□□ -1.88
LSM6P62312 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LSM6P62312 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM6P62312 CEP170P1-201ENST00000502249 4587 ntBASIC3.31□□□□□ -1.88
LSM6P62312 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LSM6P62312 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM6P62312 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM6P62312 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM6P62312 SNORA11B-201ENST00000408175 129 ntBASIC3.31□□□□□ -1.88
LSM6P62312 MTND2P15-201ENST00000418575 892 ntBASIC3.31□□□□□ -1.88
LSM6P62312 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms