Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC087499.8-201ENST00000578406 226 ntBASIC3.66□□□□□ -1.82
VSX2P58304 AC022884.3-201ENST00000579571 248 ntBASIC3.66□□□□□ -1.82
VSX2P58304 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
VSX2P58304 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
VSX2P58304 BNIP3P33-201ENST00000598912 569 ntBASIC3.66□□□□□ -1.82
VSX2P58304 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.66□□□□□ -1.82
VSX2P58304 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.66□□□□□ -1.82
VSX2P58304 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.66□□□□□ -1.82
VSX2P58304 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.66□□□□□ -1.82
VSX2P58304 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VSX2P58304 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.66□□□□□ -1.82
VSX2P58304 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
VSX2P58304 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VSX2P58304 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VSX2P58304 IPO8P1-201ENST00000455509 3109 ntBASIC3.66□□□□□ -1.82
VSX2P58304 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
VSX2P58304 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VSX2P58304 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VSX2P58304 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VSX2P58304 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VSX2P58304 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.65□□□□□ -1.82
VSX2P58304 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VSX2P58304 RNU6-666P-201ENST00000363499 107 ntBASIC3.65□□□□□ -1.83
VSX2P58304 RNU6-304P-201ENST00000364855 107 ntBASIC3.65□□□□□ -1.83
VSX2P58304 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VSX2P58304 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VSX2P58304 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VSX2P58304 AL512504.1-201ENST00000415494 778 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC011742.1-201ENST00000431448 434 ntBASIC3.65□□□□□ -1.83
VSX2P58304 RRM2P4-201ENST00000441721 562 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AP002812.1-201ENST00000495378 474 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC068305.1-201ENST00000497406 726 ntBASIC3.65□□□□□ -1.83
VSX2P58304 FTH1P9-201ENST00000513251 355 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC016550.3-201ENST00000515706 767 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.65□□□□□ -1.83
VSX2P58304 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 AC008083.2-201ENST00000546707 476 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 AGGF1P8-201ENST00000562979 1000 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC009101.1-201ENST00000568135 242 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.65□□□□□ -1.83
VSX2P58304 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 AL354760.1-201ENST00000608357 643 ntBASIC3.65□□□□□ -1.83
VSX2P58304 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.65□□□□□ -1.83
VSX2P58304 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VSX2P58304 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
VSX2P58304 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.65□□□□□ -1.83
VSX2P58304 UBE3AP2-201ENST00000429033 2259 ntBASIC3.65□□□□□ -1.83
VSX2P58304 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
VSX2P58304 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VSX2P58304 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VSX2P58304 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VSX2P58304 AL359715.4-201ENST00000606629 1436 ntBASIC3.64□□□□□ -1.83
VSX2P58304 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VSX2P58304 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VSX2P58304 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VSX2P58304 MIR423-201ENST00000362201 94 ntBASIC3.64□□□□□ -1.83
VSX2P58304 SNORA62.3-201ENST00000365110 153 ntBASIC3.64□□□□□ -1.83
VSX2P58304 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VSX2P58304 AL138878.1-201ENST00000405131 347 ntBASIC3.64□□□□□ -1.83
VSX2P58304 RNU6ATAC-201ENST00000408749 126 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AL591419.1-201ENST00000427423 339 ntBASIC3.64□□□□□ -1.83
VSX2P58304 USP12PY-201ENST00000427677 1064 ntBASIC3.64□□□□□ -1.83
VSX2P58304 OR4F13P-201ENST00000428478 931 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.64□□□□□ -1.83
VSX2P58304 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.64□□□□□ -1.83
VSX2P58304 RSL24D1P2-201ENST00000445584 366 ntBASIC3.64□□□□□ -1.83
VSX2P58304 YWHAQP9-201ENST00000445891 512 ntBASIC3.64□□□□□ -1.83
VSX2P58304 RPL7P48-201ENST00000461513 746 ntBASIC3.64□□□□□ -1.83
VSX2P58304 RPS20P21-201ENST00000466859 343 ntBASIC3.64□□□□□ -1.83
VSX2P58304 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VSX2P58304 AC010342.1-201ENST00000514047 877 ntBASIC3.64□□□□□ -1.83
VSX2P58304 SNORA67.7-201ENST00000516664 135 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.64□□□□□ -1.83
VSX2P58304 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VSX2P58304 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.64□□□□□ -1.83
VSX2P58304 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.64□□□□□ -1.83
VSX2P58304 MIR3158-1-201ENST00000583596 81 ntBASIC3.64□□□□□ -1.83
VSX2P58304 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.64□□□□□ -1.83
VSX2P58304 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.64□□□□□ -1.83
VSX2P58304 MRPS35P3-201ENST00000603189 709 ntBASIC3.64□□□□□ -1.83
VSX2P58304 BX322635.1-201ENST00000605804 496 ntBASIC3.64□□□□□ -1.83
VSX2P58304 MIR92B-201ENST00000607575 96 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AC055764.2-201ENST00000610089 670 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AC016911.1-201ENST00000613297 452 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AC006133.1-201ENST00000617106 264 ntBASIC3.64□□□□□ -1.83
VSX2P58304 AL713922.2-201ENST00000619384 716 ntBASIC3.64□□□□□ -1.83
VSX2P58304 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.64□□□□□ -1.83
VSX2P58304 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VSX2P58304 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VSX2P58304 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.64□□□□□ -1.83
VSX2P58304 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VSX2P58304 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
VSX2P58304 EXOC5P1-201ENST00000510543 1969 ntBASIC3.63□□□□□ -1.83
VSX2P58304 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
VSX2P58304 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms