Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 MTCYBP16-201ENST00000509187 1129 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC005351.1-201ENST00000511152 786 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 HMGB3P13-201ENST00000511263 607 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 RPL7L1P13-201ENST00000511702 739 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC119751.5-201ENST00000514077 770 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC087808.1-201ENST00000520501 361 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN20P56880 C1GALT1P3-201ENST00000522049 819 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AP001207.1-201ENST00000524051 481 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AP001636.2-201ENST00000525517 696 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC010198.2-201ENST00000550612 259 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 ZNF321P-202ENST00000550843 495 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC018552.3-201ENST00000567416 561 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC234771.5-201ENST00000600161 514 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN20P56880 AC008638.3-201ENST00000603341 463 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN20P56880 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CLDN20P56880 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN20P56880 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
CLDN20P56880 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN20P56880 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN20P56880 AC087190.4-201ENST00000574616 8334 ntBASIC4.19□□□□□ -1.74
CLDN20P56880 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN20P56880 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN20P56880 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN20P56880 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CLDN20P56880 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CLDN20P56880 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN20P56880 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN20P56880 Y_RNA.192-201ENST00000363977 102 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 SNORD113.2-201ENST00000364166 89 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 RHOT1P2-201ENST00000366423 333 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN20P56880 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN20P56880 SNORA70F-201ENST00000384142 135 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL080315.1-201ENST00000406055 466 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL512430.2-201ENST00000406786 339 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 RPL7P44-201ENST00000424827 742 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN20P56880 RPL37P1-201ENST00000432310 284 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AL353597.2-202ENST00000434901 373 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC093155.1-201ENST00000440164 826 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 RAB11AP1-201ENST00000442978 646 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN20P56880 EEF1A1P1-201ENST00000447052 739 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC239809.1-201ENST00000450470 217 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC104763.1-201ENST00000475274 360 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 RN7SL459P-201ENST00000481078 302 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC011352.3-201ENST00000505162 593 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC008837.2-201ENST00000513076 418 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN20P56880 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN20P56880 SERPINE4P-201ENST00000554978 281 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC087465.1-201ENST00000560574 245 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL354943.1-201ENST00000572103 781 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC017100.2-201ENST00000584628 355 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC110743.1-201ENST00000584870 478 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC021171.1-201ENST00000603137 706 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 DUXAP3-201ENST00000603616 594 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AL139395.1-201ENST00000603662 160 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN20P56880 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN20P56880 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC091304.6-201ENST00000619761 202 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN20P56880 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN20P56880 AP003072.4-201ENST00000624580 310 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 U3.53-201ENST00000628922 216 ntBASIC4.18□□□□□ -1.74
CLDN20P56880 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN20P56880 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms