Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AP001148.1-201ENST00000624124 2359 ntBASIC3.24□□□□□ -1.89
CLDN12P56749 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN12P56749 RIOK3P1-201ENST00000418778 1528 ntBASIC3.24□□□□□ -1.89
CLDN12P56749 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
CLDN12P56749 MTND5P3-201ENST00000438536 1800 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLDN12P56749 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLDN12P56749 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN12P56749 MTND4P31-201ENST00000425607 1343 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 CASC19-261ENST00000641853 1638 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN12P56749 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN12P56749 AL136116.1-201ENST00000403591 381 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 MTCO3P31-201ENST00000405526 789 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 HNRNPDP2-201ENST00000406475 478 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 HMGB3P20-201ENST00000417997 600 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 RPL29P29-201ENST00000448725 423 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN12P56749 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN12P56749 OR7L1P-201ENST00000456181 380 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 RPS20P21-201ENST00000466859 343 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 PTGES3P3-201ENST00000511479 482 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN12P56749 NDUFB9P3-201ENST00000521269 501 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN12P56749 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN12P56749 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN12P56749 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN12P56749 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN12P56749 AC026951.1-201ENST00000559530 2459 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN12P56749 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN12P56749 PCNAP1-202ENST00000595299 752 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN12P56749 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN12P56749 AL592436.1-201ENST00000605135 558 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 AL354760.1-201ENST00000608357 643 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 MIR6864-201ENST00000617935 70 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 MIR6730-201ENST00000622213 67 ntBASIC3.23□□□□□ -1.89
CLDN12P56749 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN12P56749 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN12P56749 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN12P56749 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 SEPT7P7-201ENST00000420492 1301 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN12P56749 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN12P56749 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CLDN12P56749 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 U1.1-201ENST00000384101 164 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLDN12P56749 AL133270.1-201ENST00000402635 279 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AC004987.3-201ENST00000413879 771 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 TCEA1P2-201ENST00000420496 906 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AL160175.1-201ENST00000428124 247 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 ARF4P2-201ENST00000430209 526 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN12P56749 RPS7P5-201ENST00000441482 581 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN12P56749 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN12P56749 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN12P56749 RPS3AP6-201ENST00000484430 795 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 RPS4XP15-201ENST00000489210 795 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN12P56749 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN12P56749 AC026784.1-201ENST00000507986 352 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 SOD1P3-201ENST00000518682 454 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AC138701.1-201ENST00000524329 714 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AP002812.4-201ENST00000532139 286 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 AC008011.1-201ENST00000545989 227 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AC137768.1-201ENST00000549998 553 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AC074029.1-201ENST00000552531 1044 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AL389895.1-201ENST00000554127 252 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN12P56749 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN12P56749 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 SNORA62.6-201ENST00000606322 83 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN12P56749 AC019193.2-201ENST00000610012 634 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 AP000346.3-201ENST00000622821 210 ntBASIC3.22□□□□□ -1.89
CLDN12P56749 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN12P56749 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLDN12P56749 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN12P56749 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms