Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC007342.8-201ENST00000623278 678 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 AC015726.3-201ENST00000624501 418 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN6P56747 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN6P56747 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CLDN6P56747 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN6P56747 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN6P56747 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN6P56747 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN6P56747 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 PRO1804-201ENST00000623780 2050 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN6P56747 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 RNU2-65P-201ENST00000410162 185 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLDN6P56747 AL606490.7-201ENST00000433136 191 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN6P56747 RAD1P2-201ENST00000446414 663 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 AC017037.1-201ENST00000508460 471 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN6P56747 HMGN1P15-201ENST00000513870 295 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 OR5B10P-201ENST00000532869 642 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN6P56747 AC007458.1-201ENST00000542812 373 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN6P56747 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 ZNF415P1-201ENST00000582279 1166 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN6P56747 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN6P56747 AL355816.1-201ENST00000607951 118 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN6P56747 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN6P56747 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
CLDN6P56747 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.71□□□□□ -1.81
CLDN6P56747 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN6P56747 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 MARK2P15-201ENST00000432204 2186 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 MIR421-201ENST00000365696 85 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 MIR708-201ENST00000390708 88 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 RPL30P3-201ENST00000424262 333 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 HIGD1AP4-201ENST00000430194 280 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 AL031663.1-201ENST00000437445 219 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 CBX1P4-201ENST00000439415 457 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN6P56747 AC023512.1-201ENST00000444513 499 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC115115.1-201ENST00000449927 248 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN6P56747 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 SEPT14P1-201ENST00000458703 648 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC018635.1-201ENST00000468292 1030 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 AL358832.1-201ENST00000497800 389 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC023050.1-201ENST00000498198 304 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 FABP5P6-201ENST00000510588 409 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 HMGB3P13-201ENST00000511263 607 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC108120.2-201ENST00000512973 294 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 SNORA70.17-201ENST00000516449 133 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN6P56747 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN6P56747 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 ABI1P1-201ENST00000603375 1120 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN6P56747 OR6R2P-201ENST00000609216 300 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC074276.2-201ENST00000619891 348 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 AC009452.1-201ENST00000640823 606 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CLDN6P56747 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLDN6P56747 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN6P56747 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN6P56747 AC097504.1-201ENST00000515103 2415 ntBASIC3.71□□□□□ -1.82
CLDN6P56747 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN6P56747 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
CLDN6P56747 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN6P56747 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLDN6P56747 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
CLDN6P56747 AL161912.2-201ENST00000565707 3007 ntBASIC3.7□□□□□ -1.82
CLDN6P56747 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN6P56747 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CLDN6P56747 SNORA48.2-201ENST00000390926 124 ntBASIC3.7□□□□□ -1.82
CLDN6P56747 SOD2P1-201ENST00000396543 562 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms