Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.43□□□□□ -1.7
LIMK1P53667 RPL37P1-201ENST00000432310 284 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 USP9YP7-201ENST00000436723 430 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AC009263.1-201ENST00000441193 1239 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.43□□□□□ -1.7
LIMK1P53667 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.43□□□□□ -1.7
LIMK1P53667 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 OR51B8P-201ENST00000449892 769 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 USP9YP32-201ENST00000452432 430 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 HMGB3P30-201ENST00000457863 606 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 RN7SKP234-201ENST00000517173 224 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AC090281.1-201ENST00000523019 276 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.43□□□□□ -1.7
LIMK1P53667 OR5BC1P-201ENST00000529327 739 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.43□□□□□ -1.7
LIMK1P53667 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.43□□□□□ -1.7
LIMK1P53667 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 CENPUP2-201ENST00000555897 1186 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.43□□□□□ -1.7
LIMK1P53667 AL121834.1-201ENST00000572284 509 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 uc_338.32-201ENST00000615087 172 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AC126544.2-201ENST00000625174 749 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 AL672167.1-205ENST00000641112 3080 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 AC046144.1-201ENST00000478559 1853 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 NMD3P1-201ENST00000439704 1488 ntBASIC4.43□□□□□ -1.7
LIMK1P53667 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
LIMK1P53667 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIMK1P53667 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 EOGT-210ENST00000615922 1931 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.42□□□□□ -1.7
LIMK1P53667 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 LARP1BP1-201ENST00000506036 1359 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.42□□□□□ -1.7
LIMK1P53667 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LIMK1P53667 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LIMK1P53667 SNORA63.1-201ENST00000362493 131 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 RNA5SP167-201ENST00000365461 116 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 RNU6-356P-201ENST00000384140 107 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 RNU2-65P-201ENST00000410162 185 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AL160275.2-201ENST00000412010 394 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.42□□□□□ -1.7
LIMK1P53667 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.42□□□□□ -1.7
LIMK1P53667 AC002542.1-201ENST00000440683 193 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AL353748.1-201ENST00000440753 474 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 RPS26P30-201ENST00000443431 335 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.42□□□□□ -1.7
LIMK1P53667 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.42□□□□□ -1.7
LIMK1P53667 ATP5G1P3-201ENST00000463301 410 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AC087385.1-201ENST00000475062 312 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.42□□□□□ -1.7
LIMK1P53667 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.42□□□□□ -1.7
LIMK1P53667 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.42□□□□□ -1.7
LIMK1P53667 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.42□□□□□ -1.7
LIMK1P53667 NPM1P41-201ENST00000512920 831 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.42□□□□□ -1.7
LIMK1P53667 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 AC053481.4-201ENST00000583164 216 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AC113403.1-201ENST00000604910 193 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 BNIP3P4-201ENST00000604946 565 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AC097504.2-201ENST00000608088 454 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 uc_338.13-201ENST00000618243 179 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 AC006065.6-201ENST00000625201 545 ntBASIC4.42□□□□□ -1.7
LIMK1P53667 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
LIMK1P53667 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.42□□□□□ -1.7
LIMK1P53667 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIMK1P53667 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.42□□□□□ -1.7
LIMK1P53667 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 NOL8P1-201ENST00000508336 3529 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 MAPK10-320ENST00000641462 6696 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LIMK1P53667 RNU5B-1-201ENST00000363286 116 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 RNA5SP391-201ENST00000363456 119 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 SNORA51.12-201ENST00000384448 134 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 RNU6-932P-201ENST00000391108 106 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms