Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 EXOSC3P1-201ENST00000448649 500 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 CDY23P-201ENST00000451661 1014 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 PRSS3P4-201ENST00000453323 162 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.65□□□□□ -1.83
HCFC1P51610 AL035407.2-201ENST00000454090 378 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 RNU7-27P-201ENST00000459281 62 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC006517.1-201ENST00000480485 328 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 RPS4XP15-201ENST00000489210 795 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC111193.1-201ENST00000504097 155 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 RNA5SP360-201ENST00000516555 118 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.65□□□□□ -1.83
HCFC1P51610 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.65□□□□□ -1.83
HCFC1P51610 AC006518.2-201ENST00000542513 940 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
HCFC1P51610 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.65□□□□□ -1.83
HCFC1P51610 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.65□□□□□ -1.83
HCFC1P51610 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCFC1P51610 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.65□□□□□ -1.83
HCFC1P51610 RN7SL622P-201ENST00000585292 275 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.65□□□□□ -1.83
HCFC1P51610 AC113368.1-201ENST00000603736 382 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC233280.2-201ENST00000603917 1070 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.65□□□□□ -1.83
HCFC1P51610 AC244100.1-202ENST00000621554 382 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC024595.1-201ENST00000623088 387 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.65□□□□□ -1.83
HCFC1P51610 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HCFC1P51610 AL138820.1-201ENST00000617901 5305 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 AC106871.1-201ENST00000568324 3102 ntBASIC3.65□□□□□ -1.83
HCFC1P51610 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC1P51610 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC1P51610 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC1P51610 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HCFC1P51610 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HCFC1P51610 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 RNA5SP175-201ENST00000364275 119 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HCFC1P51610 DDX18P3-201ENST00000404856 2007 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 EIF1P3-201ENST00000423841 334 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 SKP1P3-201ENST00000429280 487 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 MTCO2P20-201ENST00000437339 673 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC1P51610 AL358794.1-201ENST00000445689 381 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 RPS11P1-201ENST00000451072 473 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC1P51610 AC025554.1-201ENST00000505641 188 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.64□□□□□ -1.83
HCFC1P51610 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.64□□□□□ -1.83
HCFC1P51610 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 SNORA19.3-201ENST00000516165 130 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 DYNLL1P4-201ENST00000549314 266 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC1P51610 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HCFC1P51610 AC008638.3-201ENST00000603341 463 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 AC024220.1-201ENST00000603675 484 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 AC018618.2-201ENST00000604770 446 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 AC105074.1-201ENST00000623380 3095 ntBASIC3.64□□□□□ -1.83
HCFC1P51610 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HCFC1P51610 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HCFC1P51610 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC1P51610 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC1P51610 OR4A15-201ENST00000314706 1035 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 RNA5SP27-201ENST00000363839 119 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 SNORA5A-201ENST00000384111 134 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 RNA5SP146-201ENST00000410743 123 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 SSR1P2-201ENST00000415208 787 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC1P51610 PNRC2P1-201ENST00000423940 420 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.63□□□□□ -1.83
HCFC1P51610 HIGD1AP12-201ENST00000427832 281 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC1P51610 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC1P51610 RPL5P32-201ENST00000454085 879 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AL139824.2-201ENST00000458731 1095 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AC098583.1-201ENST00000480875 255 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.63□□□□□ -1.83
HCFC1P51610 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC1P51610 AC100770.1-201ENST00000532310 322 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AC023538.1-201ENST00000534576 736 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 OR8K4P-201ENST00000534608 872 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC1P51610 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC1P51610 AL031666.3-201ENST00000609320 1006 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AC140725.3-201ENST00000616193 880 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 MIR6075-201ENST00000620782 95 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC1P51610 OR6C71P-202ENST00000641886 1107 ntBASIC3.63□□□□□ -1.83
HCFC1P51610 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC1P51610 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.63□□□□□ -1.83
HCFC1P51610 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC1P51610 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.63□□□□□ -1.83
HCFC1P51610 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC1P51610 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms