Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 NBEAP1-201ENST00000554452 979 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC084757.1-201ENST00000559987 490 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.2□□□□□ -1.58
TM4SF4P48230 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC231759.1-201ENST00000616455 597 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC069209.1-201ENST00000619282 651 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.2□□□□□ -1.58
TM4SF4P48230 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TM4SF4P48230 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.2□□□□□ -1.58
TM4SF4P48230 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM4SF4P48230 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 MTND4P8-201ENST00000514997 1362 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 OR51H2P-202ENST00000641424 3046 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 MIR3065-201ENST00000390137 79 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC119751.3-201ENST00000399720 670 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AP000580.1-201ENST00000404439 358 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC004022.2-201ENST00000413824 193 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AL008987.1-201ENST00000415528 237 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 AC092447.3-201ENST00000426027 686 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.19□□□□□ -1.58
TM4SF4P48230 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 SKP1P3-201ENST00000429280 487 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 MTCYBP31-201ENST00000438855 1122 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AL357520.1-201ENST00000441557 453 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 COX6CP18-201ENST00000448769 222 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 RFC5P1-201ENST00000454419 874 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC093166.2-201ENST00000455969 1017 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 RPL5P24-201ENST00000463742 885 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 RPL35P6-201ENST00000490024 372 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC020890.1-201ENST00000491837 504 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 RN7SL691P-201ENST00000494487 301 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 SETP14-201ENST00000497538 873 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 KRT19P6-201ENST00000510983 209 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.19□□□□□ -1.58
TM4SF4P48230 AC026726.1-201ENST00000512859 601 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 RNU5A-4P-201ENST00000516588 111 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 RN7SKP82-201ENST00000516786 223 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.19□□□□□ -1.58
TM4SF4P48230 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.19□□□□□ -1.58
TM4SF4P48230 RPL23AP53-201ENST00000521854 457 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 AC005832.3-201ENST00000537929 631 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.19□□□□□ -1.58
TM4SF4P48230 AC068446.3-201ENST00000555285 382 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.19□□□□□ -1.58
TM4SF4P48230 EIF5A2P1-201ENST00000564027 460 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC090312.1-201ENST00000580637 348 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 VN1R78P-201ENST00000597393 564 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC020634.1-201ENST00000608701 549 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC005332.6-201ENST00000613178 446 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC107075.1-201ENST00000613695 314 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AL355493.4-201ENST00000618530 292 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 AC140479.6-201ENST00000633535 357 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 AL161912.2-201ENST00000565707 3007 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.19□□□□□ -1.58
TM4SF4P48230 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TM4SF4P48230 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.19□□□□□ -1.58
TM4SF4P48230 CPHL1P-201ENST00000461341 3407 ntBASIC5.19□□□□□ -1.58
TM4SF4P48230 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
TM4SF4P48230 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.18□□□□□ -1.58
TM4SF4P48230 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TM4SF4P48230 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.18□□□□□ -1.58
TM4SF4P48230 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.18□□□□□ -1.58
TM4SF4P48230 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TM4SF4P48230 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TM4SF4P48230 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TM4SF4P48230 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.18□□□□□ -1.58
TM4SF4P48230 RNU2-42P-201ENST00000410697 113 ntBASIC5.18□□□□□ -1.58
TM4SF4P48230 OR8G2P-201ENST00000412796 908 ntBASIC5.18□□□□□ -1.58
TM4SF4P48230 NUP35P2-201ENST00000416748 943 ntBASIC5.18□□□□□ -1.58
TM4SF4P48230 BOLA3P4-201ENST00000418151 400 ntBASIC5.18□□□□□ -1.58
TM4SF4P48230 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.18□□□□□ -1.58
TM4SF4P48230 IFNNP1-201ENST00000429219 553 ntBASIC5.18□□□□□ -1.58
TM4SF4P48230 BTF3P10-201ENST00000433415 495 ntBASIC5.18□□□□□ -1.58
TM4SF4P48230 YWHAZP8-201ENST00000436935 731 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms