Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RPS29P22-201ENST00000472363 168 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 RN7SL459P-201ENST00000481078 302 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC108729.1-201ENST00000487812 947 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 AK3P4-201ENST00000504283 583 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC020593.1-201ENST00000507399 299 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HNF4AP41235 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC008694.2-201ENST00000517591 306 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AP001372.4-201ENST00000524889 472 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 CBX3P5-201ENST00000552017 521 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC084783.1-201ENST00000565846 910 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 MIR4330-201ENST00000579077 105 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.28□□□□□ -1.72
HNF4AP41235 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.28□□□□□ -1.72
HNF4AP41235 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 RPL12P25-202ENST00000598100 674 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC008638.3-201ENST00000603341 463 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 Z98200.1-201ENST00000607298 470 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 uc_338.32-201ENST00000615087 172 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 AP000346.3-201ENST00000622821 210 ntBASIC4.28□□□□□ -1.72
HNF4AP41235 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.28□□□□□ -1.72
HNF4AP41235 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HNF4AP41235 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HNF4AP41235 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HNF4AP41235 AL645568.2-201ENST00000432815 1337 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 AC008725.1-201ENST00000605123 2263 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC095050.2-201ENST00000510748 1458 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HNF4AP41235 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.27□□□□□ -1.73
HNF4AP41235 RNU6-444P-201ENST00000383988 108 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 RNU6-1257P-201ENST00000384625 110 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 MIR3065-201ENST00000390137 79 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HNF4AP41235 EIF5P1-201ENST00000400019 1231 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 ZNF603P-201ENST00000405613 487 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC008280.1-201ENST00000418851 412 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC004552.1-201ENST00000419089 348 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 PAICSP7-201ENST00000419829 962 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.27□□□□□ -1.73
HNF4AP41235 AC073335.1-201ENST00000427776 363 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
HNF4AP41235 RPL23AP1-201ENST00000428990 471 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 SKP1P3-201ENST00000429280 487 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 AL138878.2-201ENST00000440581 1241 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC114495.1-201ENST00000441274 436 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 AL096803.2-201ENST00000450032 677 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 RPS15AP1-201ENST00000457423 391 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 RPL32P14-201ENST00000463196 378 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 RPS26P3-201ENST00000470205 348 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 RPS4XP6-201ENST00000477670 797 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC090543.2-201ENST00000483963 348 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC004057.1-201ENST00000485827 348 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 RN7SL812P-201ENST00000493791 279 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC092045.1-201ENST00000495716 1231 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC078918.1-201ENST00000498515 228 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 GTF2IP9-201ENST00000502460 301 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC025445.1-201ENST00000502728 300 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 MTCO1P30-201ENST00000515244 580 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 CDH12P4-201ENST00000517835 295 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 CDH12P3-201ENST00000517935 295 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 CDH12P1-201ENST00000518435 295 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.27□□□□□ -1.73
HNF4AP41235 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 AC069240.1-201ENST00000548774 375 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.27□□□□□ -1.73
HNF4AP41235 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.27□□□□□ -1.73
HNF4AP41235 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.27□□□□□ -1.73
HNF4AP41235 AC022069.1-201ENST00000582910 658 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AL160290.3-201ENST00000604869 165 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AL009028.1-201ENST00000604895 802 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 AC021851.1-201ENST00000608537 1082 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 MIR6820-201ENST00000611508 62 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 U73479.1-201ENST00000618062 168 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 MIR6891-201ENST00000618788 93 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HNF4AP41235 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HNF4AP41235 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms