Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC010975.3-201ENST00000618727 978 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AC007342.8-201ENST00000623278 678 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL15A1P39059 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL15A1P39059 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
COL15A1P39059 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.34□□□□□ -1.56
COL15A1P39059 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
COL15A1P39059 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL15A1P39059 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.33□□□□□ -1.56
COL15A1P39059 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.33□□□□□ -1.56
COL15A1P39059 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL15A1P39059 RNU4-6P-201ENST00000410804 122 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 KRR1P1-201ENST00000419430 803 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AL513175.2-201ENST00000422071 443 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 SKP1P3-201ENST00000429280 487 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.33□□□□□ -1.56
COL15A1P39059 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.33□□□□□ -1.56
COL15A1P39059 AL050341.1-201ENST00000447743 313 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 RPS27AP18-201ENST00000515536 459 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL15A1P39059 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 HSPE1P5-201ENST00000561489 272 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AC145350.1-201ENST00000567426 208 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.33□□□□□ -1.56
COL15A1P39059 PCNAP1-202ENST00000595299 752 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 AC024220.1-201ENST00000603675 484 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AC090525.3-201ENST00000605601 189 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 AC091304.6-201ENST00000619761 202 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 AC019278.1-201ENST00000623516 479 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL15A1P39059 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
COL15A1P39059 FAM91A3P-201ENST00000456826 2544 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL15A1P39059 GTF2H2B-203ENST00000508065 1432 ntBASIC5.33□□□□□ -1.56
COL15A1P39059 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL15A1P39059 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 AL161912.2-201ENST00000565707 3007 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL15A1P39059 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AL136310.1-201ENST00000404926 654 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.32□□□□□ -1.56
COL15A1P39059 RPS7P9-201ENST00000414704 586 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 TCEA1P4-201ENST00000415066 844 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 TAF13P2-201ENST00000416876 286 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 HMGB1P49-201ENST00000418882 569 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AL691449.1-201ENST00000426570 421 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 RPL37P1-201ENST00000432310 284 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AC084290.1-201ENST00000434995 374 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.32□□□□□ -1.56
COL15A1P39059 AC022431.1-201ENST00000450941 438 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 RPS6P2-201ENST00000454208 705 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AC005410.1-202ENST00000460347 485 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 RPS29P19-201ENST00000479709 171 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.32□□□□□ -1.56
COL15A1P39059 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.32□□□□□ -1.56
COL15A1P39059 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.32□□□□□ -1.56
COL15A1P39059 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.32□□□□□ -1.56
COL15A1P39059 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.32□□□□□ -1.56
COL15A1P39059 AC008083.2-201ENST00000546707 476 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.32□□□□□ -1.56
COL15A1P39059 MIR5685-201ENST00000579080 79 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 MIR548Y-201ENST00000582739 110 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 AC023813.4-201ENST00000607580 580 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 VN1R74P-201ENST00000613259 503 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 AC004777.1-201ENST00000624317 287 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
COL15A1P39059 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL15A1P39059 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL15A1P39059 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
COL15A1P39059 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL15A1P39059 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 USP9YP4-201ENST00000424401 1745 ntBASIC5.32□□□□□ -1.56
COL15A1P39059 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.32□□□□□ -1.56
COL15A1P39059 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL15A1P39059 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL15A1P39059 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL15A1P39059 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms