Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 RNA5SP283-201ENST00000365604 119 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRIM23P36406 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 RPS23P10-201ENST00000416185 486 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 UBE2D3P3-201ENST00000426992 425 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 PRELID3BP10-201ENST00000431957 584 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM23P36406 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM23P36406 ELOCP11-201ENST00000436690 332 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 RPL23AP89-201ENST00000439324 255 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM23P36406 RPL21P89-201ENST00000444021 467 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 ELOCP16-201ENST00000444494 332 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 RPL6P5-201ENST00000445678 828 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 RPL38P1-201ENST00000460914 211 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 AC020898.1-201ENST00000474167 787 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM23P36406 MTCO2P9-201ENST00000503214 694 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 HPRT1P2-201ENST00000505250 544 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 AC133963.2-201ENST00000513686 578 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM23P36406 UBTFL9-201ENST00000534504 1148 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM23P36406 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.08□□□□□ -1.76
TRIM23P36406 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM23P36406 MIR8084-201ENST00000614105 89 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM23P36406 MIR7702-201ENST00000621931 59 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 AP002371.2-201ENST00000624450 503 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 MAPK10-372ENST00000641954 3413 ntBASIC4.08□□□□□ -1.76
TRIM23P36406 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM23P36406 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
TRIM23P36406 AL139811.1-201ENST00000424779 2299 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM23P36406 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM23P36406 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM23P36406 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM23P36406 CASC19-261ENST00000641853 1638 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 HSPA8P19-201ENST00000505359 1517 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AC083899.2-201ENST00000423285 1376 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM23P36406 SNORA60-201ENST00000362396 134 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 RN7SKP280-201ENST00000364196 304 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 ATP5F1P6-201ENST00000402768 767 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC073310.1-201ENST00000423226 1033 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM23P36406 VDAC1P6-201ENST00000430062 855 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 ETF1P3-201ENST00000430422 1160 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AC005189.1-201ENST00000431286 310 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 YWHAEP5-201ENST00000431545 765 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 HMGB1P16-201ENST00000447155 540 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 RPL36AP13-201ENST00000457490 317 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 TPT1P3-201ENST00000492841 512 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 PPBPP1-201ENST00000510807 373 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM23P36406 AC005255.1-201ENST00000593748 216 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AC120053.1-201ENST00000607706 736 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AC006946.3-201ENST00000609791 756 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AC080188.3-201ENST00000624842 748 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 AP005264.7-201ENST00000625003 745 ntBASIC4.07□□□□□ -1.76
TRIM23P36406 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TRIM23P36406 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM23P36406 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM23P36406 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM23P36406 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM23P36406 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM23P36406 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM23P36406 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 MFSD8-213ENST00000641134 1327 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM23P36406 Y_RNA.126-201ENST00000363382 111 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 ZNF603P-201ENST00000405613 487 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 RPL21P65-201ENST00000406094 466 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms