Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC010285.3-201ENST00000511668 676 ntBASIC3.82□□□□□ -1.8
RORAP35398 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.82□□□□□ -1.8
RORAP35398 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.82□□□□□ -1.8
RORAP35398 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.82□□□□□ -1.8
RORAP35398 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.82□□□□□ -1.8
RORAP35398 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
RORAP35398 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.82□□□□□ -1.8
RORAP35398 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.82□□□□□ -1.8
RORAP35398 AC120057.2-201ENST00000571520 271 ntBASIC3.82□□□□□ -1.8
RORAP35398 AC025627.2-201ENST00000576220 160 ntBASIC3.82□□□□□ -1.8
RORAP35398 AC012417.1-201ENST00000582307 1039 ntBASIC3.82□□□□□ -1.8
RORAP35398 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.82□□□□□ -1.8
RORAP35398 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.82□□□□□ -1.8
RORAP35398 MTCO3P22-201ENST00000603219 784 ntBASIC3.82□□□□□ -1.8
RORAP35398 AL451044.1-201ENST00000604867 238 ntBASIC3.82□□□□□ -1.8
RORAP35398 AL592436.1-201ENST00000605135 558 ntBASIC3.82□□□□□ -1.8
RORAP35398 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.82□□□□□ -1.8
RORAP35398 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.82□□□□□ -1.8
RORAP35398 AC090912.3-201ENST00000609775 533 ntBASIC3.82□□□□□ -1.8
RORAP35398 AL392048.1-201ENST00000613946 534 ntBASIC3.82□□□□□ -1.8
RORAP35398 AC020658.4-201ENST00000613987 684 ntBASIC3.82□□□□□ -1.8
RORAP35398 MIR7973-1-201ENST00000614683 76 ntBASIC3.82□□□□□ -1.8
RORAP35398 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.82□□□□□ -1.8
RORAP35398 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
RORAP35398 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RORAP35398 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RORAP35398 FAM91A3P-201ENST00000456826 2544 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC106871.1-201ENST00000568324 3102 ntBASIC3.81□□□□□ -1.8
RORAP35398 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.81□□□□□ -1.8
RORAP35398 DCAF13P1-201ENST00000495256 1330 ntBASIC3.81□□□□□ -1.8
RORAP35398 RNA5SP322-201ENST00000363617 119 ntBASIC3.81□□□□□ -1.8
RORAP35398 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
RORAP35398 RNU1-85P-201ENST00000364127 164 ntBASIC3.81□□□□□ -1.8
RORAP35398 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RORAP35398 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.81□□□□□ -1.8
RORAP35398 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
RORAP35398 MIR554-201ENST00000384874 96 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC105402.1-201ENST00000413336 545 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
RORAP35398 MTND2P15-201ENST00000418575 892 ntBASIC3.81□□□□□ -1.8
RORAP35398 AL590623.1-201ENST00000427864 105 ntBASIC3.81□□□□□ -1.8
RORAP35398 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 AC114878.1-201ENST00000441166 358 ntBASIC3.81□□□□□ -1.8
RORAP35398 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 MTND2P8-201ENST00000450555 1025 ntBASIC3.81□□□□□ -1.8
RORAP35398 PPIAP3-201ENST00000450588 505 ntBASIC3.81□□□□□ -1.8
RORAP35398 RPS11P1-201ENST00000451072 473 ntBASIC3.81□□□□□ -1.8
RORAP35398 HMGB1P5-202ENST00000451497 985 ntBASIC3.81□□□□□ -1.8
RORAP35398 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 TVP23BP2-201ENST00000455082 615 ntBASIC3.81□□□□□ -1.8
RORAP35398 AP000873.1-201ENST00000463987 400 ntBASIC3.81□□□□□ -1.8
RORAP35398 RPL9P32-201ENST00000464118 620 ntBASIC3.81□□□□□ -1.8
RORAP35398 RPS4XP15-201ENST00000489210 795 ntBASIC3.81□□□□□ -1.8
RORAP35398 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 SNORA70.14-201ENST00000516205 110 ntBASIC3.81□□□□□ -1.8
RORAP35398 SNORA67.7-201ENST00000516664 135 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 AC023632.4-201ENST00000517783 191 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.81□□□□□ -1.8
RORAP35398 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.81□□□□□ -1.8
RORAP35398 AL049870.4-201ENST00000555741 486 ntBASIC3.81□□□□□ -1.8
RORAP35398 HSPE1P5-201ENST00000561489 272 ntBASIC3.81□□□□□ -1.8
RORAP35398 AL109741.3-201ENST00000561748 592 ntBASIC3.81□□□□□ -1.8
RORAP35398 AGGF1P8-201ENST00000562979 1000 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.81□□□□□ -1.8
RORAP35398 MIR5685-201ENST00000579080 79 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC242628.1-201ENST00000606810 391 ntBASIC3.81□□□□□ -1.8
RORAP35398 AC015802.5-201ENST00000607478 399 ntBASIC3.81□□□□□ -1.8
RORAP35398 AL356863.1-201ENST00000623378 1080 ntBASIC3.81□□□□□ -1.8
RORAP35398 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.81□□□□□ -1.8
RORAP35398 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.81□□□□□ -1.8
RORAP35398 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.81□□□□□ -1.8
RORAP35398 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
RORAP35398 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
RORAP35398 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.8□□□□□ -1.8
RORAP35398 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RORAP35398 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RORAP35398 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RORAP35398 OR5T3-201ENST00000303059 1023 ntBASIC3.8□□□□□ -1.8
RORAP35398 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RORAP35398 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.8□□□□□ -1.8
RORAP35398 RNU6-185P-201ENST00000384421 107 ntBASIC3.8□□□□□ -1.8
RORAP35398 HMGB3P19-201ENST00000403971 560 ntBASIC3.8□□□□□ -1.8
RORAP35398 Z86062.1-201ENST00000406773 777 ntBASIC3.8□□□□□ -1.8
RORAP35398 AC004022.2-201ENST00000413824 193 ntBASIC3.8□□□□□ -1.8
RORAP35398 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.8□□□□□ -1.8
RORAP35398 PTP4A1P5-201ENST00000420305 455 ntBASIC3.8□□□□□ -1.8
RORAP35398 AL365396.1-201ENST00000430854 671 ntBASIC3.8□□□□□ -1.8
RORAP35398 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
RORAP35398 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RORAP35398 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 TMED11P-201ENST00000479478 690 ntBASIC3.8□□□□□ -1.8
RORAP35398 SUMO1P1-201ENST00000497904 306 ntBASIC3.8□□□□□ -1.8
RORAP35398 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms