Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RPL23AP22-201ENST00000437556 453 ntBASIC2.57□□□□□ -2
CKS2P33552 AL645931.1-201ENST00000439737 410 ntBASIC2.57□□□□□ -2
CKS2P33552 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.57□□□□□ -2
CKS2P33552 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 TMED11P-201ENST00000479478 690 ntBASIC2.57□□□□□ -2
CKS2P33552 AC021205.2-201ENST00000480069 347 ntBASIC2.57□□□□□ -2
CKS2P33552 RPS4XP15-201ENST00000489210 795 ntBASIC2.57□□□□□ -2
CKS2P33552 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.57□□□□□ -2
CKS2P33552 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 RNU2-58P-201ENST00000516403 183 ntBASIC2.57□□□□□ -2
CKS2P33552 MIR2276-201ENST00000516886 89 ntBASIC2.57□□□□□ -2
CKS2P33552 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AC104027.1-201ENST00000521887 300 ntBASIC2.57□□□□□ -2
CKS2P33552 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.57□□□□□ -2
CKS2P33552 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.57□□□□□ -2
CKS2P33552 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AC120057.2-201ENST00000571520 271 ntBASIC2.57□□□□□ -2
CKS2P33552 RN7SL600P-201ENST00000581811 299 ntBASIC2.57□□□□□ -2
CKS2P33552 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.57□□□□□ -2
CKS2P33552 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.57□□□□□ -2
CKS2P33552 AL356218.2-201ENST00000605264 187 ntBASIC2.57□□□□□ -2
CKS2P33552 AC011816.2-201ENST00000607089 556 ntBASIC2.57□□□□□ -2
CKS2P33552 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.57□□□□□ -2
CKS2P33552 AL121890.3-201ENST00000618494 516 ntBASIC2.57□□□□□ -2
CKS2P33552 AC092628.2-201ENST00000622492 339 ntBASIC2.57□□□□□ -2
CKS2P33552 AC018445.2-201ENST00000622987 260 ntBASIC2.57□□□□□ -2
CKS2P33552 AP003355.3-201ENST00000623465 114 ntBASIC2.57□□□□□ -2
CKS2P33552 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.57□□□□□ -2
CKS2P33552 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.57□□□□□ -2
CKS2P33552 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.57□□□□□ -2
CKS2P33552 AC091152.2-201ENST00000591628 2569 ntBASIC2.57□□□□□ -2
CKS2P33552 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKS2P33552 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKS2P33552 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.57□□□□□ -2
CKS2P33552 AC021755.1-201ENST00000559747 1447 ntBASIC2.57□□□□□ -2
CKS2P33552 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKS2P33552 NMD3P1-201ENST00000439704 1488 ntBASIC2.57□□□□□ -2
CKS2P33552 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKS2P33552 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.57□□□□□ -2
CKS2P33552 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CKS2P33552 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CKS2P33552 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CKS2P33552 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CKS2P33552 AC139713.2-214ENST00000642059 1811 ntBASIC2.56□□□□□ -2
CKS2P33552 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 ZNF826P-207ENST00000622273 1910 ntBASIC2.56□□□□□ -2
CKS2P33552 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 U3.11-201ENST00000364476 212 ntBASIC2.56□□□□□ -2
CKS2P33552 RNA5SP505-201ENST00000364748 108 ntBASIC2.56□□□□□ -2
CKS2P33552 MIR550A3-201ENST00000390735 95 ntBASIC2.56□□□□□ -2
CKS2P33552 AC092642.1-201ENST00000392417 425 ntBASIC2.56□□□□□ -2
CKS2P33552 SNORA3.3-201ENST00000408712 125 ntBASIC2.56□□□□□ -2
CKS2P33552 HMGB3P23-201ENST00000414981 585 ntBASIC2.56□□□□□ -2
CKS2P33552 GTF2IP23-201ENST00000423746 351 ntBASIC2.56□□□□□ -2
CKS2P33552 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.56□□□□□ -2
CKS2P33552 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 ISCA1P2-201ENST00000438679 421 ntBASIC2.56□□□□□ -2
CKS2P33552 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.56□□□□□ -2
CKS2P33552 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 RN7SL594P-201ENST00000470590 287 ntBASIC2.56□□□□□ -2
CKS2P33552 SETP14-201ENST00000497538 873 ntBASIC2.56□□□□□ -2
CKS2P33552 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.56□□□□□ -2
CKS2P33552 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.56□□□□□ -2
CKS2P33552 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.56□□□□□ -2
CKS2P33552 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.56□□□□□ -2
CKS2P33552 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.56□□□□□ -2
CKS2P33552 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.56□□□□□ -2
CKS2P33552 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.56□□□□□ -2
CKS2P33552 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.56□□□□□ -2
CKS2P33552 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.56□□□□□ -2
CKS2P33552 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 SNORA50A-202ENST00000629536 136 ntBASIC2.56□□□□□ -2
CKS2P33552 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 AC024560.2-201ENST00000507981 1497 ntBASIC2.56□□□□□ -2
CKS2P33552 AL592494.2-201ENST00000425455 1548 ntBASIC2.56□□□□□ -2
CKS2P33552 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKS2P33552 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.55□□□□□ -2
CKS2P33552 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CKS2P33552 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CKS2P33552 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.55□□□□□ -2
CKS2P33552 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CKS2P33552 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CKS2P33552 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.55□□□□□ -2
CKS2P33552 MIR148B-201ENST00000362252 99 ntBASIC2.55□□□□□ -2
CKS2P33552 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.55□□□□□ -2
CKS2P33552 AC007899.1-201ENST00000412776 775 ntBASIC2.55□□□□□ -2
CKS2P33552 AL356968.1-201ENST00000416622 474 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms