Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.42□□□□□ -1.86
COL5A1P20908 AC010486.1-201ENST00000511793 424 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL5A1P20908 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.42□□□□□ -1.86
COL5A1P20908 LARP7P3-201ENST00000579888 337 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AP001542.1-201ENST00000591314 200 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.42□□□□□ -1.86
COL5A1P20908 MIR7112-201ENST00000616126 65 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.42□□□□□ -1.86
COL5A1P20908 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.41□□□□□ -1.86
COL5A1P20908 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL5A1P20908 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
COL5A1P20908 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL5A1P20908 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.41□□□□□ -1.86
COL5A1P20908 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.41□□□□□ -1.86
COL5A1P20908 SYT14P1-201ENST00000481459 721 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 RPS3AP50-201ENST00000487064 803 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 TRBV12-2-201ENST00000489763 344 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 AC006445.1-201ENST00000491925 405 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.41□□□□□ -1.86
COL5A1P20908 AC027281.1-201ENST00000574178 758 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 MIR5680-201ENST00000577577 84 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 AC006504.3-201ENST00000586818 523 ntBASIC3.41□□□□□ -1.86
COL5A1P20908 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.41□□□□□ -1.86
COL5A1P20908 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL5A1P20908 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL5A1P20908 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL5A1P20908 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL5A1P20908 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL5A1P20908 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
COL5A1P20908 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.41□□□□□ -1.86
COL5A1P20908 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.4□□□□□ -1.86
COL5A1P20908 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL5A1P20908 RNA5SP126-201ENST00000365092 109 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.4□□□□□ -1.86
COL5A1P20908 RNA5SP80-201ENST00000410475 111 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 RN7SKP247-201ENST00000411094 308 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 AC099563.1-201ENST00000456086 418 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 AC114982.2-201ENST00000461396 358 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.4□□□□□ -1.86
COL5A1P20908 AC080014.1-201ENST00000496877 1201 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.4□□□□□ -1.86
COL5A1P20908 FCF1P8-201ENST00000510322 597 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.4□□□□□ -1.86
COL5A1P20908 OR5AP1P-201ENST00000529730 940 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.4□□□□□ -1.86
COL5A1P20908 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.4□□□□□ -1.86
COL5A1P20908 MIR4276-201ENST00000584832 70 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 AC006946.3-201ENST00000609791 756 ntBASIC3.4□□□□□ -1.86
COL5A1P20908 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.4□□□□□ -1.86
COL5A1P20908 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL5A1P20908 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.4□□□□□ -1.87
COL5A1P20908 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.4□□□□□ -1.87
COL5A1P20908 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
COL5A1P20908 HSPE1P27-201ENST00000430808 296 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.4□□□□□ -1.87
COL5A1P20908 RPS6P2-201ENST00000454208 705 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.4□□□□□ -1.87
COL5A1P20908 KC877373.1-201ENST00000479066 408 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 AC069499.1-201ENST00000489433 509 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.4□□□□□ -1.87
COL5A1P20908 AC034105.3-201ENST00000565294 442 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 AC006023.1-201ENST00000603944 259 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.87
COL5A1P20908 AC138932.5-201ENST00000617759 563 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 AL732618.1-201ENST00000623251 301 ntBASIC3.4□□□□□ -1.87
COL5A1P20908 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL5A1P20908 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL5A1P20908 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL5A1P20908 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL5A1P20908 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL5A1P20908 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
COL5A1P20908 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.39□□□□□ -1.87
COL5A1P20908 MTHFD2P2-201ENST00000407725 247 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.39□□□□□ -1.87
COL5A1P20908 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.39□□□□□ -1.87
COL5A1P20908 NPM1P48-201ENST00000436002 853 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.39□□□□□ -1.87
COL5A1P20908 AC073522.1-201ENST00000483312 377 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 UBA52P3-201ENST00000491303 382 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.39□□□□□ -1.87
COL5A1P20908 AC113430.1-201ENST00000506872 718 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.39□□□□□ -1.87
COL5A1P20908 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.39□□□□□ -1.87
COL5A1P20908 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.39□□□□□ -1.87
COL5A1P20908 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL5A1P20908 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.39□□□□□ -1.87
COL5A1P20908 AC241377.1-201ENST00000619797 406 ntBASIC3.39□□□□□ -1.87
COL5A1P20908 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
COL5A1P20908 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms