Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA1P17096 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.51□□□□□ -1.85
HMGA1P17096 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
HMGA1P17096 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA1P17096 AC092868.3-201ENST00000560515 784 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 AC009303.3-201ENST00000591103 736 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 AC005000.2-201ENST00000605468 310 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 AC009464.1-201ENST00000615731 469 ntBASIC3.51□□□□□ -1.85
HMGA1P17096 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
HMGA1P17096 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGA1P17096 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HMGA1P17096 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA1P17096 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 TNPO1P3-201ENST00000436471 2662 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 CR383658.2-201ENST00000547576 1525 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGA1P17096 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGA1P17096 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
HMGA1P17096 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 AC063979.1-201ENST00000415539 377 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 AJ239321.1-201ENST00000424255 564 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGA1P17096 ATP5C1P1-201ENST00000441945 895 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 HMGB1P16-201ENST00000447155 540 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGA1P17096 AC017015.1-201ENST00000477387 286 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 RPS6P4-201ENST00000494693 758 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 HMGB1P21-201ENST00000502313 581 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGA1P17096 SNORA70.19-201ENST00000516717 90 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 IGKV2-23-201ENST00000518729 323 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 HIGD1AP18-201ENST00000520730 278 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.5□□□□□ -1.85
HMGA1P17096 MIR4738-201ENST00000579134 87 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA1P17096 RMST_9.1-201ENST00000619945 193 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HMGA1P17096 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA1P17096 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HMGA1P17096 AC119744.1-201ENST00000454746 1715 ntBASIC3.5□□□□□ -1.85
HMGA1P17096 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGA1P17096 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
HMGA1P17096 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGA1P17096 SNORA48.2-201ENST00000390926 124 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 TAF9BP1-201ENST00000396646 746 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 NACAP7-201ENST00000407371 609 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AL445213.1-201ENST00000412589 747 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGA1P17096 AL512649.1-201ENST00000428997 581 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AL591623.2-201ENST00000449978 222 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 SEPT7P3-201ENST00000455017 621 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 RPS4XP2-201ENST00000458402 793 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA1P17096 FCF1P3-201ENST00000496394 590 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGA1P17096 NARSP2-201ENST00000518524 679 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGA1P17096 MIR5004-201ENST00000579078 107 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGA1P17096 AL162713.1-201ENST00000604480 262 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AL008729.2-201ENST00000606393 473 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGA1P17096 OR2BH1P-201ENST00000608850 864 ntBASIC3.49□□□□□ -1.85
HMGA1P17096 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA1P17096 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HMGA1P17096 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGA1P17096 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HMGA1P17096 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGA1P17096 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HMGA1P17096 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGA1P17096 ZNF833P-201ENST00000424938 1494 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGA1P17096 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
HMGA1P17096 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGA1P17096 RNA5SP374-201ENST00000362939 125 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 RNU6-249P-201ENST00000363016 102 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 HMGB3P18-201ENST00000406327 590 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGA1P17096 AC097262.1-201ENST00000452559 548 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms