Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC087369.1-201ENST00000520775 996 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 PDCD5P1-201ENST00000543528 309 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL731537.2-201ENST00000561565 951 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC007224.1-201ENST00000564410 144 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AGGF1P6-201ENST00000569213 976 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC120057.2-201ENST00000571520 271 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC004775.1-201ENST00000607389 753 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 RMST_8.1-201ENST00000610287 165 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL118556.2-201ENST00000614375 824 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC107308.1-201ENST00000615897 301 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 MIR6500-201ENST00000622700 86 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 PHKBP1-201ENST00000450951 1951 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AL589826.1-201ENST00000340697 249 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 RNU6-146P-201ENST00000384602 108 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 MIR1183-201ENST00000408856 89 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC105402.1-201ENST00000413336 545 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 LINC01881-201ENST00000416103 412 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 CBX1P4-201ENST00000439415 457 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AL500527.1-201ENST00000448532 255 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 NUTF2P7-201ENST00000453086 375 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 MTND2P6-201ENST00000455337 1030 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC089999.1-201ENST00000460336 374 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC103987.1-201ENST00000473394 348 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 NPM1P17-201ENST00000479221 602 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC136624.4-201ENST00000573044 370 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 SUMO2P14-201ENST00000604488 293 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC110792.4-201ENST00000609843 298 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 MIR7973-1-201ENST00000614683 76 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 RNA5SP196-201ENST00000625967 102 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AL445437.1-201ENST00000623157 3087 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 AC096656.1-201ENST00000623826 1364 ntBASIC3.37□□□□□ -1.87
HLA-DPB1P04440 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HLA-DPB1P04440 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 RNF6P1-201ENST00000444889 1784 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 RNU6-628P-201ENST00000410675 107 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 MTCO3P4-201ENST00000419236 787 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 SEC63P1-201ENST00000425785 1258 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 MORF4L1P7-201ENST00000426038 703 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 RPL34P26-201ENST00000445636 354 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 PRELID3BP5-201ENST00000508612 460 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 PCBP2P3-201ENST00000509726 843 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 FTH1P21-201ENST00000512179 511 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC108064.1-201ENST00000513791 460 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms