Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL162274.2-201ENST00000614406 332 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A1P02462 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
COL4A1P02462 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A1P02462 AL136116.1-201ENST00000403591 381 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.03□□□□□ -1.76
COL4A1P02462 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A1P02462 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A1P02462 MTND2P25-201ENST00000449028 610 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 AC005229.2-201ENST00000456995 399 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 AC023141.12-201ENST00000512399 199 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 AL121594.4-201ENST00000556211 1196 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 HMGN2P47-201ENST00000559378 272 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.03□□□□□ -1.76
COL4A1P02462 UBL5P2-201ENST00000583788 219 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 AL583832.1-201ENST00000603227 784 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 SNORD39.4-201ENST00000620099 78 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
COL4A1P02462 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
COL4A1P02462 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.02□□□□□ -1.77
COL4A1P02462 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A1P02462 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A1P02462 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A1P02462 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC006989.1-201ENST00000427212 131 ntBASIC4.02□□□□□ -1.77
COL4A1P02462 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 AL139132.1-201ENST00000431587 344 ntBASIC4.02□□□□□ -1.77
COL4A1P02462 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 MYL12AP1-201ENST00000518490 515 ntBASIC4.02□□□□□ -1.77
COL4A1P02462 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 AL451007.1-201ENST00000595491 289 ntBASIC4.02□□□□□ -1.77
COL4A1P02462 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A1P02462 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 AC024023.1-201ENST00000624530 922 ntBASIC4.02□□□□□ -1.77
COL4A1P02462 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A1P02462 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A1P02462 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A1P02462 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A1P02462 SNORA80A-201ENST00000363922 136 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.01□□□□□ -1.77
COL4A1P02462 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.01□□□□□ -1.77
COL4A1P02462 RNF19BPX-201ENST00000426224 625 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 CCRL1P1-201ENST00000449542 1053 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.01□□□□□ -1.77
COL4A1P02462 APOOP4-201ENST00000513530 597 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.01□□□□□ -1.77
COL4A1P02462 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.01□□□□□ -1.77
COL4A1P02462 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.01□□□□□ -1.77
COL4A1P02462 AC022146.1-201ENST00000595307 847 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 BNIP3P38-201ENST00000601117 544 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COL4A1P02462 KPNA2P2-201ENST00000419546 1489 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 AL645568.2-201ENST00000432815 1337 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 AC006484.1-201ENST00000435086 1884 ntBASIC4.01□□□□□ -1.77
COL4A1P02462 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A1P02462 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4□□□□□ -1.77
COL4A1P02462 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4□□□□□ -1.77
COL4A1P02462 MRPS18BP2-201ENST00000434310 759 ntBASIC4□□□□□ -1.77
COL4A1P02462 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 AC073587.1-201ENST00000447093 876 ntBASIC4□□□□□ -1.77
COL4A1P02462 MTND6P32-201ENST00000457611 483 ntBASIC4□□□□□ -1.77
COL4A1P02462 RPL27AP5-201ENST00000469428 449 ntBASIC4□□□□□ -1.77
COL4A1P02462 RPL5P16-201ENST00000471467 790 ntBASIC4□□□□□ -1.77
COL4A1P02462 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4□□□□□ -1.77
COL4A1P02462 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AC113192.3-201ENST00000529152 742 ntBASIC4□□□□□ -1.77
COL4A1P02462 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4□□□□□ -1.77
COL4A1P02462 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4□□□□□ -1.77
COL4A1P02462 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
COL4A1P02462 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4□□□□□ -1.77
COL4A1P02462 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 AC073325.2-201ENST00000339545 159 ntBASIC4□□□□□ -1.77
COL4A1P02462 MIR448-201ENST00000362131 111 ntBASIC4□□□□□ -1.77
COL4A1P02462 RNU1-140P-201ENST00000365040 165 ntBASIC4□□□□□ -1.77
COL4A1P02462 SNORA7.4-201ENST00000384249 137 ntBASIC4□□□□□ -1.77
COL4A1P02462 Y_RNA.500-201ENST00000384466 111 ntBASIC4□□□□□ -1.77
COL4A1P02462 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AL357552.1-201ENST00000445254 415 ntBASIC4□□□□□ -1.77
COL4A1P02462 AC138409.2-202ENST00000507274 458 ntBASIC4□□□□□ -1.77
COL4A1P02462 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4□□□□□ -1.77
COL4A1P02462 AC026782.2-201ENST00000510845 636 ntBASIC4□□□□□ -1.77
COL4A1P02462 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4□□□□□ -1.77
COL4A1P02462 AC018692.3-201ENST00000623929 123 ntBASIC4□□□□□ -1.77
COL4A1P02462 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms