Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC010809.3-201ENST00000621310 641 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.37□□□□□ -1.71
COL2A1P02458 AC244258.1-201ENST00000637553 1071 ntBASIC4.37□□□□□ -1.71
COL2A1P02458 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.36□□□□□ -1.71
COL2A1P02458 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 AC083843.3-201ENST00000623679 2186 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 MTCO1P4-201ENST00000520516 1409 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 AC007823.1-201ENST00000569932 1566 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 AC004944.1-201ENST00000517807 3059 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 RNU4-23P-201ENST00000362839 140 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL2A1P02458 Y_RNA.510-201ENST00000384511 114 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 MIR128-1-201ENST00000384921 82 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 SNORA48.2-201ENST00000390926 124 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 HLFP1-201ENST00000402375 499 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.36□□□□□ -1.71
COL2A1P02458 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.36□□□□□ -1.71
COL2A1P02458 AC114973.1-201ENST00000429057 632 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 OR52Y1P-201ENST00000452418 828 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AP001486.1-201ENST00000463339 476 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC017015.1-201ENST00000477387 286 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC021146.5-201ENST00000503544 545 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC025768.1-201ENST00000510057 267 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 SNORD116-30-201ENST00000516468 85 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.36□□□□□ -1.71
COL2A1P02458 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.36□□□□□ -1.71
COL2A1P02458 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.36□□□□□ -1.71
COL2A1P02458 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 AC025811.1-201ENST00000604312 472 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC034236.3-201ENST00000605999 461 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC011816.2-201ENST00000607089 556 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AL513477.2-201ENST00000607858 568 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 AL392088.2-201ENST00000637607 285 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 AL445984.1-201ENST00000637834 659 ntBASIC4.36□□□□□ -1.71
COL2A1P02458 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL2A1P02458 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.36□□□□□ -1.71
COL2A1P02458 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.36□□□□□ -1.71
COL2A1P02458 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.35□□□□□ -1.71
COL2A1P02458 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.35□□□□□ -1.71
COL2A1P02458 AC012321.1-201ENST00000561622 1588 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL2A1P02458 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.35□□□□□ -1.71
COL2A1P02458 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL2A1P02458 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.35□□□□□ -1.71
COL2A1P02458 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 RNA5SP306-201ENST00000411087 107 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.35□□□□□ -1.71
COL2A1P02458 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.35□□□□□ -1.71
COL2A1P02458 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.35□□□□□ -1.71
COL2A1P02458 AC244033.1-201ENST00000426826 870 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AC092634.2-201ENST00000428146 1010 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AC087650.1-201ENST00000431445 468 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.35□□□□□ -1.71
COL2A1P02458 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.35□□□□□ -1.71
COL2A1P02458 AC098824.1-201ENST00000453565 980 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 MTATP6P14-201ENST00000455189 673 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AL122001.1-201ENST00000457027 370 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AL136126.1-201ENST00000473603 402 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 NPM1P29-201ENST00000483112 803 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.35□□□□□ -1.71
COL2A1P02458 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.35□□□□□ -1.71
COL2A1P02458 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.35□□□□□ -1.71
COL2A1P02458 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.35□□□□□ -1.71
COL2A1P02458 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.35□□□□□ -1.71
COL2A1P02458 AF129408.1-201ENST00000608767 431 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AC009974.1-201ENST00000608881 455 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AL356490.1-201ENST00000623079 479 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AL596275.2-204ENST00000641628 552 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 AL596275.2-206ENST00000641957 626 ntBASIC4.35□□□□□ -1.71
COL2A1P02458 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL2A1P02458 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.34□□□□□ -1.71
COL2A1P02458 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL2A1P02458 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.34□□□□□ -1.71
COL2A1P02458 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL2A1P02458 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.34□□□□□ -1.71
COL2A1P02458 RNU1-33P-201ENST00000364249 162 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
COL2A1P02458 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms