Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.12□□□□□ -1.75
CLPTM1O96005 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 NPM1P47-201ENST00000560843 856 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 CYP2C60P-201ENST00000566088 139 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC023824.3-201ENST00000569003 562 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 RN7SL802P-201ENST00000577858 299 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.12□□□□□ -1.75
CLPTM1O96005 MIR5699-201ENST00000578903 90 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 CCDC58P3-201ENST00000590792 430 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AL512782.1-201ENST00000603093 364 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 RN7SL722P-201ENST00000617780 284 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 RN7SL565P-201ENST00000618246 284 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC120349.3-201ENST00000624377 529 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.12□□□□□ -1.75
CLPTM1O96005 U6.107-201ENST00000637108 79 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLPTM1O96005 BX649567.1-201ENST00000642071 1134 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AC073055.1-201ENST00000456901 1621 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLPTM1O96005 AC111188.2-201ENST00000529697 1387 ntBASIC4.12□□□□□ -1.75
CLPTM1O96005 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
CLPTM1O96005 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CLPTM1O96005 AC100871.1-201ENST00000507871 1456 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLPTM1O96005 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 RNU6-353P-201ENST00000364266 108 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 U3.15-201ENST00000365398 212 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 RNU6-224P-201ENST00000384055 107 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLPTM1O96005 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLPTM1O96005 RNU1-82P-201ENST00000390851 165 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 RPS7P9-201ENST00000414704 586 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 RAD23BP1-201ENST00000421404 1227 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AL356535.1-201ENST00000440335 398 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 CR769776.1-201ENST00000441254 787 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 Z73417.1-201ENST00000447373 778 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 ISCUP1-201ENST00000454451 448 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 NAP1L1P3-201ENST00000462291 880 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 MTCO2P6-201ENST00000463134 685 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC005912.1-201ENST00000495392 255 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.11□□□□□ -1.75
CLPTM1O96005 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC091868.1-201ENST00000508746 304 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC083923.1-201ENST00000523708 376 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC023538.1-201ENST00000534576 736 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC027104.1-201ENST00000563702 681 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC095057.3-201ENST00000567102 1157 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC091042.1-201ENST00000579213 173 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 ELOCP35-201ENST00000604289 336 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AL391358.1-201ENST00000605342 190 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC010857.1-201ENST00000606398 594 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 Z98200.1-201ENST00000607298 470 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AL713922.2-201ENST00000619384 716 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AL121895.2-201ENST00000619558 447 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AC013470.4-201ENST00000619978 986 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC019226.2-201ENST00000625973 424 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 MAPK10-263ENST00000641052 4307 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLPTM1O96005 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.11□□□□□ -1.75
CLPTM1O96005 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.11□□□□□ -1.75
CLPTM1O96005 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLPTM1O96005 AC139769.1-204ENST00000472297 1931 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 SEC63P2-201ENST00000503863 1939 ntBASIC4.11□□□□□ -1.75
CLPTM1O96005 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLPTM1O96005 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLPTM1O96005 ANKRD36P1-201ENST00000344424 659 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms