Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.9□□□□□ -1.63
PROM1O43490 AC233702.9-201ENST00000581528 203 ntBASIC4.9□□□□□ -1.63
PROM1O43490 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.9□□□□□ -1.63
PROM1O43490 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 AC012360.2-201ENST00000609349 391 ntBASIC4.9□□□□□ -1.63
PROM1O43490 MIR6820-201ENST00000611508 62 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AL049539.1-201ENST00000611964 459 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC025594.3-201ENST00000613068 790 ntBASIC4.9□□□□□ -1.63
PROM1O43490 AC131238.1-201ENST00000617135 328 ntBASIC4.9□□□□□ -1.63
PROM1O43490 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.9□□□□□ -1.63
PROM1O43490 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.9□□□□□ -1.63
PROM1O43490 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PROM1O43490 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PROM1O43490 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 PANDAR-201ENST00000629595 1506 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC011155.1-201ENST00000316512 456 ntBASIC4.89□□□□□ -1.63
PROM1O43490 U8.4-201ENST00000363626 134 ntBASIC4.89□□□□□ -1.63
PROM1O43490 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PROM1O43490 TMSB4XP8-201ENST00000402089 135 ntBASIC4.89□□□□□ -1.63
PROM1O43490 DUTP5-201ENST00000406790 469 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AL450992.3-201ENST00000413192 568 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AL139128.1-201ENST00000413921 941 ntBASIC4.89□□□□□ -1.63
PROM1O43490 TMSB4XP6-201ENST00000415187 135 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC004448.2-201ENST00000422360 586 ntBASIC4.89□□□□□ -1.63
PROM1O43490 TMSB4XP1-201ENST00000424567 135 ntBASIC4.89□□□□□ -1.63
PROM1O43490 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC007559.1-201ENST00000428736 355 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 VN1R54P-201ENST00000435210 1049 ntBASIC4.89□□□□□ -1.63
PROM1O43490 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 AL935212.3-201ENST00000450729 284 ntBASIC4.89□□□□□ -1.63
PROM1O43490 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 GYG1P1-201ENST00000460864 698 ntBASIC4.89□□□□□ -1.63
PROM1O43490 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 AL035404.1-201ENST00000497982 568 ntBASIC4.89□□□□□ -1.63
PROM1O43490 BNIP3P41-201ENST00000503774 571 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 AC097173.1-201ENST00000505862 819 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC110775.1-201ENST00000513721 462 ntBASIC4.89□□□□□ -1.63
PROM1O43490 RN7SKP66-201ENST00000516681 231 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.89□□□□□ -1.63
PROM1O43490 OR5AK1P-201ENST00000524837 922 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AP003392.2-201ENST00000527269 208 ntBASIC4.89□□□□□ -1.63
PROM1O43490 MTCYBP41-201ENST00000528913 1123 ntBASIC4.89□□□□□ -1.63
PROM1O43490 OR5D15P-201ENST00000531671 942 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.89□□□□□ -1.63
PROM1O43490 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.89□□□□□ -1.63
PROM1O43490 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 AL390816.3-201ENST00000604527 1066 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC068276.1-201ENST00000605793 379 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC091946.2-201ENST00000606105 291 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AP002360.4-201ENST00000606980 481 ntBASIC4.89□□□□□ -1.63
PROM1O43490 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.89□□□□□ -1.63
PROM1O43490 AC106028.5-201ENST00000610332 395 ntBASIC4.89□□□□□ -1.63
PROM1O43490 AC126915.2-201ENST00000610957 190 ntBASIC4.89□□□□□ -1.63
PROM1O43490 MIR7844-201ENST00000616161 122 ntBASIC4.89□□□□□ -1.63
PROM1O43490 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 AC073348.1-201ENST00000623002 331 ntBASIC4.89□□□□□ -1.63
PROM1O43490 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PROM1O43490 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.89□□□□□ -1.63
PROM1O43490 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.89□□□□□ -1.63
PROM1O43490 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PROM1O43490 AC114546.3-201ENST00000623582 1734 ntBASIC4.89□□□□□ -1.63
PROM1O43490 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PROM1O43490 CYP1D1P-201ENST00000416662 1433 ntBASIC4.89□□□□□ -1.63
PROM1O43490 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 SCARNA15-201ENST00000607520 4325 ntBASIC4.88□□□□□ -1.63
PROM1O43490 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 AL121657.1-201ENST00000327215 531 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms