Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC104260.2-201ENST00000623551 3497 ntBASIC4.22□□□□□ -1.73
NDUFS4O43181 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.21□□□□□ -1.73
NDUFS4O43181 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
NDUFS4O43181 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
NDUFS4O43181 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 AC008033.1-201ENST00000216407 1162 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 MIR513B-201ENST00000385136 84 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 TMSB4XP8-201ENST00000402089 135 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AL450992.3-201ENST00000413192 568 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC004022.2-201ENST00000413824 193 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 RPL21P108-201ENST00000413857 481 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.21□□□□□ -1.74
NDUFS4O43181 TMSB4XP6-201ENST00000415187 135 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 RPL30P3-201ENST00000424262 333 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 TMSB4XP1-201ENST00000424567 135 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 DPRXP1-201ENST00000426312 460 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 HMGB3P5-201ENST00000428894 612 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC010881.1-201ENST00000433830 235 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 GTF2IP7-202ENST00000436677 309 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 CR769776.1-201ENST00000441254 787 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.21□□□□□ -1.74
NDUFS4O43181 ELOCP13-201ENST00000443934 329 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 RPL7P31-201ENST00000450192 724 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.21□□□□□ -1.74
NDUFS4O43181 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.21□□□□□ -1.74
NDUFS4O43181 DHFRP3-201ENST00000455595 559 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC006463.2-201ENST00000473326 348 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.21□□□□□ -1.74
NDUFS4O43181 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 MTATP6P22-201ENST00000507369 598 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC021146.3-201ENST00000511911 260 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.21□□□□□ -1.74
NDUFS4O43181 RNU6-488P-201ENST00000515918 99 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 RNU6-885P-201ENST00000516607 104 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 RNA5SP135-201ENST00000517019 125 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.21□□□□□ -1.74
NDUFS4O43181 EEF1A1P37-201ENST00000522748 715 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC022790.1-201ENST00000522872 204 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.21□□□□□ -1.74
NDUFS4O43181 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.21□□□□□ -1.74
NDUFS4O43181 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.21□□□□□ -1.74
NDUFS4O43181 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.21□□□□□ -1.74
NDUFS4O43181 RPL23AP97-201ENST00000568955 471 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 MIR3912-201ENST00000577566 105 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 MIR5096-201ENST00000583713 70 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC234772.3-201ENST00000602277 528 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC008745.1-201ENST00000604064 271 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC090948.1-201ENST00000607464 549 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 AL138721.1-201ENST00000616756 179 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 AC013470.4-201ENST00000619978 986 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.21□□□□□ -1.74
NDUFS4O43181 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 XPOTP1-201ENST00000443317 2398 ntBASIC4.21□□□□□ -1.74
NDUFS4O43181 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NDUFS4O43181 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NDUFS4O43181 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDUFS4O43181 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.2□□□□□ -1.74
NDUFS4O43181 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NDUFS4O43181 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDUFS4O43181 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDUFS4O43181 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
NDUFS4O43181 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NDUFS4O43181 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDUFS4O43181 IL6STP1-201ENST00000346911 1020 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 RNU6-582P-201ENST00000362989 107 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 RNU6-1293P-201ENST00000384077 107 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 RNU6-413P-201ENST00000384115 107 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 MIR217-201ENST00000384817 110 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 HDGFP1-201ENST00000405943 252 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 UBTFL3-201ENST00000418934 1024 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 RPS27AP7-201ENST00000422792 455 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 Z93242.1-201ENST00000427102 353 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 MTCO1P54-201ENST00000430139 712 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 RPEP2-201ENST00000432149 701 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.2□□□□□ -1.74
NDUFS4O43181 AC093155.1-201ENST00000440164 826 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 AC114495.1-201ENST00000441274 436 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 PHBP16-201ENST00000446318 950 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 PTENP1-201ENST00000447117 1215 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 TPT1P13-201ENST00000449760 499 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 NF1P3-201ENST00000457709 450 ntBASIC4.2□□□□□ -1.74
NDUFS4O43181 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
NDUFS4O43181 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.2□□□□□ -1.74
NDUFS4O43181 UBTFL6-201ENST00000477929 1024 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms